Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal6g0487 CTTTTTGCAAACAAAACTATTTATGTTTTCTCTTTCATTTTGAAACATAAGAGAGAGAGACGGGGGTTTGACTTTTCCATTCAATCAACCAGCTCCGACACCATCGCACTTCAGAAAATCTCTACACGGAGCATCATGAGTGTAGACCTAAAGAAAACTGCCTCTAATGGCAATGAGAATTTGTCAGTATCACAAGAACAGCAGGCACAGATAAATGAGGTGCGAAGGTTGATAGGGCCATTGTCTGGTAAGGCGTCTGTTTATTGTTCTGATGCATCCGTTGCAAGGTATTTAAGGGCACGAAATTGGAATGTTAAGAAGGCCGCTAAAATGTTGAAACAGTCCCTAAAATGGAGAGCAGAGTACAGACCAGAGGAGATTCGCTGGGAAGAGGTTGCTCCTGAAGCAGAGACAGGGAAGATCTATAGATCAAATCATACTGACAAGCATGGGAGACCAGTCCTTGTAATGAGACCTAGCCGCCAGAACACAAAGTCAACAAAAGGACAGATTAAGTATTTGGTATACTGCATGGAGAATGCTGTTTTAAATCTTCCAACACAACAAGAACAAATGGTATGGCTGATTGACTTCCAGGGTTTTAATTTGTCACATATATCAATCAAGGCGACACGTGAGACTGCCCATGTATTACAAGACCATTATCCTGAACGCCTGGGTCTGGCAATACTGTACAATCCCCCTAAGTTCTTCGAACCATTCTTCACGATGGTGAAGCCCCTGTTAGAGCCTAAGACCTTTAATAAAGTCAAGTTCGCTTACTCCGATGATCAAAACACCAAGAAGATTATGGAGGATTTGTTTGATATGGACTTTCTTGAATCTGCATTCGGTGGGAATGATGACACAGGTTTTGATATAAGTAAATATGCTGAGAGAATGAAAGAGGATGACAAGAAGAGTTCCTCTTACTGGACAGGAGAAAACTCTCCACCACCAGTCTCAAACATTGTTCCTTCTTTAGATTCGATTAGCTTAGATGCTGACTCAGAGTCTGACAATGAGAAAGTAAACTGTTCCCCTGATCCTGAGATTGAGAAAGAGATCATCAACCCCAACCAACACATTGTGGCTAATCATGGTGCTAATAATGCTAGTGCAGATATGCATTAG 1134 0.4162 LFANKTIYVFSFILKHKRERRGFDFSIQSTSSDTIALQKISTRSIMSVDLKKTASNGNENLSVSQEQQAQINEVRRLIGPLSGKASVYCSDASVARYLRARNWNVKKAAKMLKQSLKWRAEYRPEEIRWEEVAPEAETGKIYRSNHTDKHGRPVLVMRPSRQNTKSTKGQIKYLVYCMENAVLNLPTQQEQMVWLIDFQGFNLSHISIKATRETAHVLQDHYPERLGLAILYNPPKFFEPFFTMVKPLLEPKTFNKVKFAYSDDQNTKKIMEDLFDMDFLESAFGGNDDTGFDISKYAERMKEDDKKSSSYWTGENSPPPVSNIVPSLDSISLDADSESDNEKVNCSPDPEIEKEIINPNQHIVANHGANNASADMH 377
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal6g0487 377 PANTHER GH16843P 46 346 - -
Lal6g0487 377 SUPERFAMILY CRAL/TRIO N-terminal domain 63 131 IPR036273 -
Lal6g0487 377 SMART sec14_4 135 289 IPR001251 -
Lal6g0487 377 CDD SEC14 137 287 IPR001251 -
Lal6g0487 377 SUPERFAMILY CRAL/TRIO domain 129 307 IPR036865 -
Lal6g0487 377 PANTHER CRAL-TRIO LIPID BINDING DOMAIN, CRAL/TRIO DOMAIN-CONTAINING PROTEIN-RELATED 46 346 - -
Lal6g0487 377 MobiDBLite consensus disorder prediction 305 327 - -
Lal6g0487 377 Gene3D - 34 316 IPR036865 -
Lal6g0487 377 ProSiteProfiles CRAL-TRIO lipid binding domain profile. 129 292 IPR001251 -
Lal6g0487 377 SMART CRAL_TRIO_N_2 90 115 IPR011074 -
Lal6g0487 377 Pfam CRAL/TRIO, N-terminal domain 91 113 IPR011074 -
Lal6g0487 377 MobiDBLite consensus disorder prediction 311 327 - -
Lal6g0487 377 Pfam CRAL/TRIO domain 139 286 IPR001251 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal6g0487 Lal-Chr6 3116725 3121380 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal6g0487 93 257 Acyl Lipid Metabolism Gene Families AT5G47730 27.419 7.92e-10 57.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal6g0487 - - gmx:100777106 523.087
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal6g0487 6 3116725 3121380 Lal6g0487 6 3116725 3121380 ECH