Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal6g0454 ATGAGGGAGTTGCTAAAAGGTATATCTAAAAGCTTGGGCCTAGACGAAAACTTCATACATGAAAAGATGAGTGTAGAATCAGGCTCCCAATTACTGGTTATAAACTTTTACCCAGCTTGTCCAAATCCTGAACTTGTAATGGGCCTACCAGCCCACACAGATCATGGGCTTCTAACTCTTCTGACTCAAAATGAGTTTGGTGGGCTTCAAATTCAATATAATGGTCAGTGGATTCCTGTGAACCCCTTACCCAACTCTTTCCTCATTAACACTGGGGATCACTTGGAGATATTGACCAACGGGAAAATAAAGAGTGTTATTCACCGTGTGTTAGTAAACAATAAAGGAGCTAGAATTTCAGTTGCTACAGCACAAGGACCACCACTTGAGGCAGTGGTGAGCCCTGCACCGGAGTTGGTCGGAGATGATAATCCGGCAGCATATCGTGCCATTACTTATAGAGATTACTTGACGATTCAAAAAAGCAATGAACTACATGGCAAGTCATGCTTGGATCGCATTCGTATTTGA 531 0.4256 MRELLKGISKSLGLDENFIHEKMSVESGSQLLVINFYPACPNPELVMGLPAHTDHGLLTLLTQNEFGGLQIQYNGQWIPVNPLPNSFLINTGDHLEILTNGKIKSVIHRVLVNNKGARISVATAQGPPLEAVVSPAPELVGDDNPAAYRAITYRDYLTIQKSNELHGKSCLDRIRI 176
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal6g0454 176 SUPERFAMILY Clavaminate synthase-like 2 165 - -
Lal6g0454 176 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 27 127 IPR005123 -
Lal6g0454 176 PANTHER OXOGLUTARATE/IRON-DEPENDENT DIOXYGENASE 2 174 - -
Lal6g0454 176 Gene3D - 1 165 IPR027443 -
Lal6g0454 176 Pfam 2OG-Fe(II) oxygenase superfamily 30 123 IPR044861 -
Lal6g0454 176 PANTHER - 2 174 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal6g0454 Lal-Chr6 2884315 2889015 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal6g0454 4 176 Glycosyltransferase AT5G59530 38.636 2.75e-37 130
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal6g0454 - - gmx:100804301 278.87
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal6g0454 6 2884315 2889015 Lal6g0454 6 2884315 2889015 ECH