Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal6g0453 ATGAGAAGGTTCACATGGTTAACACCGTATCGGCCTTTGGCCACTTATAATTTTGTTACGAGGATTGACGAGTTTCTGATTCCGAGAGTACCATTGAGATATAGTTATATTCATGCTAGAGTATTTTCTTCTTCTGTGGAACGGGACTATTATAAATCTCTTGGTGTTCCTGAAAATGCCAGTCAGGATGAGATAAAGAAGGCATTTCATTCGCTTGCTAAAAAGTACCATCCAGATGCAAATAAGAATAATCCATCAGCAAAAAGGAAATTTCAAGATATAAGAGAAGCATATGAGACATTGAGAGATTCTACAAAGAGGGCAGAGTATGACAAGATGCGTGCTTATGGTTCAGAGAACATAGAATATGGTGATGATGACAGAGAAAGGTTTAGAAATGCCTATCGTTCTCACTTTTCTGATTCATTTCATAAAGTATTCTCCGAGATATTTGAAGAAGCAACAACTCAATTCTCGTCGAATATAGAGGTGGAATGCTCTCTTAATTTCCCAGAAGCTGTGGGAGGGTGCACCAAACATTTGTCATTTGATGCATTAGTTCCCTGCGATAGTTGTGATGGACTAGGCTATCCTGTAGATGCCAAGGCAGAAGTTTGTCCAACATGCAGGGGCTTAGGTCGGGTTACAATCCCTCCATTTACATCAACATGCATTACTTGTAAAGGATCAGGCCGTGTCATTAAGGATTTTTGCATGTCATGTAGAGGATCTGGGGTTGTTGAAGGAATTAAAGAAGTTAAAGTTACAATACCAGCAGGTGTGGATTCGGGAGATACAATCCACGTGCCAGAAGCTGGGAATGCTGCTGGAAGAGGAGGCCGACCTGGAAGTTTATACATTAAAATAAAGGTGGCTGAGGATTCAGTCTTTGTCAGAGATGGTGCAGATATCTATGTGGAATCTAATATTAGCTTTACACAGGCTATTCTTGGTGGCGAAGTTGAGGTGCCCACTTTATCAGGGAAGATGCAATTAAAAATACCTAAGGGTGTTCAACCAGGACAGCTTCTGGTGTTAAGAGGCAAAGGACTGCCAAAGCATGGGTTTCTCGTACACCACGGGGATCAGTATGTGCGTTTCCGAGTTAATTTTCCCACTGCAATTAATGAACGACAACGTGCTATACTTGAAGAACTAGCAAAGGAGGAAATAAAGGAGGAAAACAAATCATCGTTTGAAGGAAATTGGCTTTACCAGCAGCTATCTACTGGTTGA 1236 0.411 MRRFTWLTPYRPLATYNFVTRIDEFLIPRVPLRYSYIHARVFSSSVERDYYKSLGVPENASQDEIKKAFHSLAKKYHPDANKNNPSAKRKFQDIREAYETLRDSTKRAEYDKMRAYGSENIEYGDDDRERFRNAYRSHFSDSFHKVFSEIFEEATTQFSSNIEVECSLNFPEAVGGCTKHLSFDALVPCDSCDGLGYPVDAKAEVCPTCRGLGRVTIPPFTSTCITCKGSGRVIKDFCMSCRGSGVVEGIKEVKVTIPAGVDSGDTIHVPEAGNAAGRGGRPGSLYIKIKVAEDSVFVRDGADIYVESNISFTQAILGGEVEVPTLSGKMQLKIPKGVQPGQLLVLRGKGLPKHGFLVHHGDQYVRFRVNFPTAINERQRAILEELAKEEIKEENKSSFEGNWLYQQLSTG 411
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal6g0453 411 PRINTS DnaJ domain signature 51 69 IPR001623 -
Lal6g0453 411 PRINTS DnaJ domain signature 69 84 IPR001623 -
Lal6g0453 411 PRINTS DnaJ domain signature 86 106 IPR001623 -
Lal6g0453 411 PRINTS DnaJ domain signature 106 125 IPR001623 -
Lal6g0453 411 PANTHER DNAJ HOMOLOG 1, MITOCHONDRIAL-RELATED 29 405 - -
Lal6g0453 411 ProSitePatterns Nt-dnaJ domain signature. 91 110 IPR018253 -
Lal6g0453 411 Gene3D DnaJ domain 45 159 IPR036869 -
Lal6g0453 411 SUPERFAMILY HSP40/DnaJ peptide-binding domain 296 383 IPR008971 GO:0006457|GO:0051082
Lal6g0453 411 ProSiteProfiles dnaJ domain profile. 49 114 IPR001623 -
Lal6g0453 411 Pfam DnaJ domain 49 111 IPR001623 -
Lal6g0453 411 SUPERFAMILY HSP40/DnaJ peptide-binding domain 161 292 IPR008971 GO:0006457|GO:0051082
Lal6g0453 411 CDD DnaJ 49 103 IPR001623 -
Lal6g0453 411 Gene3D - 160 290 - -
Lal6g0453 411 PANTHER CHAPERONE PROTEIN DNAJ 1, MITOCHONDRIAL 29 405 - -
Lal6g0453 411 SUPERFAMILY Chaperone J-domain 47 144 IPR036869 -
Lal6g0453 411 SUPERFAMILY DnaJ/Hsp40 cysteine-rich domain 176 247 IPR036410 -
Lal6g0453 411 Hamap Chaperone protein DnaJ [dnaJ]. 46 394 IPR012724 GO:0005524|GO:0006457|GO:0009408|GO:0051082
Lal6g0453 411 CDD DnaJ_C 246 373 - -
Lal6g0453 411 Pfam DnaJ central domain 189 245 IPR001305 GO:0031072|GO:0051082
Lal6g0453 411 Gene3D - 219 252 - -
Lal6g0453 411 Gene3D - 185 218 - -
Lal6g0453 411 SMART dnaj_3 48 106 IPR001623 -
Lal6g0453 411 Pfam DnaJ C terminal domain 162 372 IPR002939 -
Lal6g0453 411 Coils Coil 376 396 - -
Lal6g0453 411 Gene3D - 292 402 - -
Lal6g0453 411 CDD DnaJ_zf 189 245 IPR001305 GO:0031072|GO:0051082
Lal6g0453 411 ProSiteProfiles Zinc finger CR-type profile. 176 250 IPR001305 GO:0031072|GO:0051082
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal6g0453 Lal-Chr6 2869485 2878549 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal6g0453 49 113 Miscellaneous Gene Families AT1G16680 37.313 1.08e-07 52.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal6g0453 - - gmx:100809440 683.33
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal6g0453 6 2869485 2878549 Lal6g0453 6 2869485 2878549 ECH