Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal6g0452 ATGACGATCAATTGCATGCTTTCGTTAAACCCTTCCAAAACCCTTCCCATTAACCCCACTCACCCGCTTCTCTCTACGTCCATAACCCGAATCACATTCAAATCGAATAACTTCCAAACCGTCATGCGAAGCGGCGGAGAAGCTCACCAACAACAACCGTCTCTGGCAGATGCTTTACTCAACAGTCCTCGCAAACACCAAATTCTCCAAACCATACACACTAACTCTCTTTCTAACTGTTGCCTCTCTGAAACCAATCTCCATTTAACCGTTCCCGGTCTCGGTCCCAAATTCCCCGGCAAAGTTCGTGATATTTATGATAGTGGAGACTACCTTGTTTTAGTCACTACGGATCGCCAGAGTGCTTTTGATAGGATTCTTGCTTCTATTCCCTTCAAGGGACAGGTTCTTAACGAGACAAGTTTGTGGTGGTTTGAAAGAACTAAGCACATAACTTCTAATGCAGTTGTATCAGCTCCAGATAAAAATGTCACAATTGCAAAGAAATGTTCAGTTTTCCCAGTTGAGTTTGTTGCTAGAGGGTTTGTGACTGGAAGTACTGATACATCATTGTGGACAGTCTACAATAATGGGATTCGTAACTATTGTGGAAATGTCCTTGCAGACGGATTGGTAAAGAATCAAAAGTTGCCTGAAAATATACTCACTCCAACAACCAAGGCTGCAGATCATGATGTTCCTGTAACTCCAGATGAGATTATAGAAAGGGGACTAATGACTCGAGCCGATTATGAAGAAGCAAGTGCAAAGGCATTAAGCTTGTTTGAATATGGACAGCAAGTGGCTGCGGAACATGGCCTCATATTGGTGGACACTAAGTATGAATTTGGGAAGGCAAATGATGGTTCAATTCTGTTGATTGATGAGGTCCATACCCCTGATTCAAGTAGATACTGGATAGCCAATTCTTACTTGGAGCGCTTTCAAAATGGTCTTGATCCTGAAAATGTTGATAAGGAGTTCTTGAGGCTGTGGTTCAAAAGTCATTGCGACCCCTACAAAGATGAGGTCCTTCCTGATGCTCCTGAAGATCTTGTCTGTGAATTGGCTTGGCGATACATTTTCTTGTATGAGACTATAACAAAGTCAAAGTTTGAGGTGCTATCAACGGAGGAGCCAATACATGACCGAATTTCAAGAAATGTTGCATCAGCTCTCTCATCTTTAAAGTAA 1194 0.4229 MTINCMLSLNPSKTLPINPTHPLLSTSITRITFKSNNFQTVMRSGGEAHQQQPSLADALLNSPRKHQILQTIHTNSLSNCCLSETNLHLTVPGLGPKFPGKVRDIYDSGDYLVLVTTDRQSAFDRILASIPFKGQVLNETSLWWFERTKHITSNAVVSAPDKNVTIAKKCSVFPVEFVARGFVTGSTDTSLWTVYNNGIRNYCGNVLADGLVKNQKLPENILTPTTKAADHDVPVTPDEIIERGLMTRADYEEASAKALSLFEYGQQVAAEHGLILVDTKYEFGKANDGSILLIDEVHTPDSSRYWIANSYLERFQNGLDPENVDKEFLRLWFKSHCDPYKDEVLPDAPEDLVCELAWRYIFLYETITKSKFEVLSTEEPIHDRISRNVASALSSLK 397
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal6g0452 397 Hamap Phosphoribosylaminoimidazole-succinocarboxamide synthase [purC]. 94 387 IPR028923 -
Lal6g0452 397 PANTHER PHOSPHORIBOSYLAMINOIMIDAZOLE-SUCCINOCARBOXAMIDE SYNTHASE 53 396 - -
Lal6g0452 397 Gene3D - 174 317 - -
Lal6g0452 397 CDD SAICAR_synt_Sc 100 368 - -
Lal6g0452 397 Gene3D Phosphorylase Kinase; domain 1 84 173 - -
Lal6g0452 397 Pfam SAICAR synthetase 100 343 IPR028923 -
Lal6g0452 397 PANTHER BNAC03G41880D PROTEIN 53 396 - -
Lal6g0452 397 SUPERFAMILY SAICAR synthase-like 88 372 - -
Lal6g0452 397 ProSitePatterns SAICAR synthetase signature 1. 172 186 IPR018236 GO:0004639|GO:0006164
Lal6g0452 397 ProSitePatterns SAICAR synthetase signature 2. 276 284 IPR018236 GO:0004639|GO:0006164
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal6g0452 K01923 - gmx:100801209 629.787
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal6g0452 6 2863395 2868718 Lal6g0452 6 2863395 2868718 ECH