Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal6g0446 ATGAGTAACAAAAGTGTTGAACCTCAGGGGAATGGAAATGGTGGTGCTTCTCTTCCTTCTTCTAATTCTGACCCTCAGCCTGGGCCACCAGAACATATGCGTTCTCATAGTGGCCATGACAATTTGGTTATCAAGAGTGGAGCACTTTTCATATCTTCTAAAGGAATTGGATGGACATCCTGGAAGAAAAGGTGGTTTATTTTGACACGAAGTTCACTTGTTTTCTTCAGAAGTGACCCAAATGCTGTTTCTCAGAAGGGAAGTGAAGTGAATTTGACCCTTGGTGGCATTGACCTCAACAATTCAGGCAGTGTTGTTGTCAAAGCAGATAAGAAACTTTTGACTGTACAATTTCCTGACATTCGTGATGGACGAGCATTCACACTTAAGGCTGAAACTACTGAGGATTTATATGAGTGGAAGAACGCACTTGAGGACGCTTTGGCACAAGCACCAAGTGCTGGTAATGTGAAGGGGCAAAATGGTGTCTCGAGGATGGATGACATTGATTCATTTGATATTTCTATGGATCAGTTGAAGGAAGTGAAGGATAGACGAGAGCCAATGAAATCTACAGTCACTGGCCGACCAATTTTACTTGCTTTGGAGGATGCTGATGGAACTCCAACTTTTTTGGAGAAGGCCTTGAGGTTCATAGAAGATCATGGAGCTCAAGTAGAAGGGATCTTGCGACAAGCAGCTGATGTTGAGCATGTTAAACATCGAGTGCAAGAATATGAGGAAGGAAAAGTTGAGTTTTTGGAGGAGGAGGAGGACGCCCATGTTATTGCTGATTGTGTTAAGTATGTAATCCGGGAATTGCCATCTTCTCCTGTCCCTGCATCTTGTTGCAAGGCGCTGTTAGAAGCTTGTAGATCTGGACGTGCCAATAGGGTTTCTGCCATGCGCATAGCAATATGGGATACTTTTCCTGAGCCAAACCGCTATCTATTGCAAAGAATACTCCTGATGATGCAAGCTGTAGCTTCCCGCAAAGCTGAGAATAAAATGAGCTCATCAGCTGTGGCAGCTTGCATGGCACCATTACTTCTTCGTCCTCTTCTAGCTGGAGATTGTGAGATTGAAAATGATTTTGATGTAGGTGGTGATGAAGATTCTGTTCAACTTTTACAAGCAGCTGCTGCAGCTAACCATGCTCAAGCGATTGTTATTACGTTATTAGAAGAATATAGCAGCATATTCGGGGAAGGTTCTGAATATCCTGGCCCTGAAATGTTCACTGACTCAGAAGATAGTGGATCTGAGAGTGAGGAGGCTACTGATGATGATTATTATGACGATGATGAAGATGAATCAATACAGGAGTCTGACGATGAAGAAGATATTGTTAGTCAAACAGATAGTGAAACTGGAGACTCTATGGCTAATGATGAGTATGATGATAAGGACCATGGTCTTTCTAGATCCAGTTCAACATCCTCAAAGGTGAGTGAAGATCTTGAAGTTGATCAGATATTGTCATCAACTTCACTTGAGGTCTCACTGCCTCAATGTGTAGATGTCAAAAGCATTGAAAATGTCACGAGCCCAATTAAGACCGCTTATGCAAATGAGTCCAATATGAACATTGATATAGTTGGAGATTTATCCACTGACCAAAATACAATGCATAATTCAAATTGTTCTAGTCCTTCATCACGCATGCAAAAATCTATAGCTGTGCCCAATGGACCAGCACCTCGGCGCTGCACTGTATTCGGGCGAACCGCTGCAAGGAAGAACCTTTCCATGGAATGCGTTAATTATCCTGATGAAGATGAAGCTGAAATTGAGAGACTTGAAGCTGTGAAGACAGAACTGCAAAACCAAATTACAGAGGAGGTGAAGGAAAATACAAAGCTTCAATCTGATGTAGAAAAACGAAAGAAAGCCTTGCAAGAGCGTCGTCTTGCACTTGAGAGAGATGTGGCTAGACTACAGGAACAGTTGCAAAAGGAGAAGAGTTCTCGAGCAACTATTGAAGCAGGACTCAAATTTCCTCAAAAACCATTGTCTGATTTATCCAGTATTGATGAAAAGAATAAGGCAGATCTTGAGGAATTAGTGTTGATAGAAGTAGATCTTGCCAACTTAGAGCAGAAAATTGATGACCTTGGGGTGCGGCTTAATTTACAACTCGAGCGGAATAATGGATCTATATTGGATTGCTTCAATCAACCCCAACATATATCAAACCATGAAAGAAACCTGAAGAATAAGCCAGATACTGAAGTTACAGCCACTTTGCAATATGAGAGGTCAGCAAGTAAGCAGGACACTTACTTTGCTGGAGCTGGAAATTTGAGTGATAGAAGGCCAGAGTTAAAGACAAAATCTTTACCAAACAAACATCCACCTACATCCAAGAAATCCGGTACTAGGGGTGAGGGAGCAAATTACACTCCTTCTGCACTGACAAAACTGTCATCCAAACTAAACTTTTTGAAGGAGCGCCGTAGTCTGGTTTCAAATGAAGGCCATGAGTCCCCGAAGCTGGAAAAAGTATCCGAACTTCTCCTACCACTTCCATCCCCCAAGAAGTCTAAAGGATATGAGTTTCACCTACCACCTCCATCCCCGGGTAAGTCTCGAGGATATGAATTTTACCTACCACTTCTATCCCCGAAATCCAGTAAGTCTCGAGGATATGAAGTTCACTCTCCAAGAGGTCCAGGCAAAGAAAGTGAATCACTCCAACATCCAGAGAAATTGAGAAAATCAGATAGTCAACCAGGCCATCACCCAGATAGACAGAATCAACATCCACCATTATATTTGAGAAGAGGGAAGTCAGAAGGCCACCATCACTCATGA 2814 0.424 MSNKSVEPQGNGNGGASLPSSNSDPQPGPPEHMRSHSGHDNLVIKSGALFISSKGIGWTSWKKRWFILTRSSLVFFRSDPNAVSQKGSEVNLTLGGIDLNNSGSVVVKADKKLLTVQFPDIRDGRAFTLKAETTEDLYEWKNALEDALAQAPSAGNVKGQNGVSRMDDIDSFDISMDQLKEVKDRREPMKSTVTGRPILLALEDADGTPTFLEKALRFIEDHGAQVEGILRQAADVEHVKHRVQEYEEGKVEFLEEEEDAHVIADCVKYVIRELPSSPVPASCCKALLEACRSGRANRVSAMRIAIWDTFPEPNRYLLQRILLMMQAVASRKAENKMSSSAVAACMAPLLLRPLLAGDCEIENDFDVGGDEDSVQLLQAAAAANHAQAIVITLLEEYSSIFGEGSEYPGPEMFTDSEDSGSESEEATDDDYYDDDEDESIQESDDEEDIVSQTDSETGDSMANDEYDDKDHGLSRSSSTSSKVSEDLEVDQILSSTSLEVSLPQCVDVKSIENVTSPIKTAYANESNMNIDIVGDLSTDQNTMHNSNCSSPSSRMQKSIAVPNGPAPRRCTVFGRTAARKNLSMECVNYPDEDEAEIERLEAVKTELQNQITEEVKENTKLQSDVEKRKKALQERRLALERDVARLQEQLQKEKSSRATIEAGLKFPQKPLSDLSSIDEKNKADLEELVLIEVDLANLEQKIDDLGVRLNLQLERNNGSILDCFNQPQHISNHERNLKNKPDTEVTATLQYERSASKQDTYFAGAGNLSDRRPELKTKSLPNKHPPTSKKSGTRGEGANYTPSALTKLSSKLNFLKERRSLVSNEGHESPKLEKVSELLLPLPSPKKSKGYEFHLPPPSPGKSRGYEFYLPLLSPKSSKSRGYEVHSPRGPGKESESLQHPEKLRKSDSQPGHHPDRQNQHPPLYLRRGKSEGHHHS 937
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal6g0446 937 PANTHER RHO GTPASE-ACTIVATING PROTEIN 7 7 829 - -
Lal6g0446 937 MobiDBLite consensus disorder prediction 843 937 - -
Lal6g0446 937 MobiDBLite consensus disorder prediction 542 563 - -
Lal6g0446 937 ProSiteProfiles PH domain profile. 42 149 IPR001849 -
Lal6g0446 937 PANTHER RHO GTPASE-ACTIVATING PROTEIN REN1 7 829 - -
Lal6g0446 937 MobiDBLite consensus disorder prediction 1 38 - -
Lal6g0446 937 MobiDBLite consensus disorder prediction 759 802 - -
Lal6g0446 937 Pfam RhoGAP domain 209 353 IPR000198 GO:0007165
Lal6g0446 937 CDD RhoGAP 209 346 - -
Lal6g0446 937 MobiDBLite consensus disorder prediction 542 559 - -
Lal6g0446 937 Coils Coil 695 715 - -
Lal6g0446 937 MobiDBLite consensus disorder prediction 417 453 - -
Lal6g0446 937 Coils Coil 597 656 - -
Lal6g0446 937 Gene3D Rho GTPase activation protein 177 402 IPR008936 GO:0007165
Lal6g0446 937 SUPERFAMILY PH domain-like 18 149 - -
Lal6g0446 937 MobiDBLite consensus disorder prediction 781 802 - -
Lal6g0446 937 MobiDBLite consensus disorder prediction 1 22 - -
Lal6g0446 937 SUPERFAMILY GTPase activation domain, GAP 207 403 IPR008936 GO:0007165
Lal6g0446 937 Pfam Leucine-zipper of ternary complex factor MIP1 632 710 IPR025757 -
Lal6g0446 937 Pfam PH domain 43 148 IPR001849 -
Lal6g0446 937 SMART RhoGAP_3 206 398 IPR000198 GO:0007165
Lal6g0446 937 MobiDBLite consensus disorder prediction 404 486 - -
Lal6g0446 937 CDD PH 45 144 - -
Lal6g0446 937 Gene3D - 31 150 IPR011993 -
Lal6g0446 937 MobiDBLite consensus disorder prediction 882 937 - -
Lal6g0446 937 ProSiteProfiles Rho GTPase-activating proteins domain profile. 200 401 IPR000198 GO:0007165
Lal6g0446 937 SMART PH_update 43 151 IPR001849 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal6g0446 Lal-Chr6 2815056 2826501 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal6g0446 - - cam:101498807 1058.51
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal6g0446 6 2815056 2826501 Lal6g0446 6 2815056 2826501 ECH