Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal6g0434 ATGTGTATTCCCAAACTATCTTCAGCATCACCATTTCTGTGTCCCACAAAAACTCACCCCAAAGTTTTGGATGCTCACCCTGATGATCAAGTTCAACATGAACTTCACAGATGGCCTACTCTTACTGAGGCCTTAGAAGAAATCAAAGCTATAGGAAAGATATCAGGTCCAACAGCTATAACTGGTTTACTCTTATATTCAAGAGCTATGATCTCAATGATTTTCCTTGGCTATCTTGGAGAGATGGAACTAGCAGGAGGCTCTCTTTCTATTGGTTTTGCAAACATCACTGGCTACTCTGTCATCTCTGGTTTAGCCATGGGTATGGAACCAATTTGTGGACAAGCTTATGGAGCAAAACAATGGAAACTACTTGGCTTAACCCTTCAAAGAACTATACTCTTACTCCTATCTATTTCCATCCCTATCTCATTAACTTGGCTTAACATGAAGACAATCCTCTTGTGGCTTGGTCAAGACCAAGAAATATCATCAATGGCACAAACTTTTCTCCATTTTTCTATACCAGACCTTTTCTTACTCTCACTTCTCCACCCTCTTAGAATCTACCTTAGGACTCAAAACATCACATTGCCATTAACTTATTGTTCAGCCATGTCAGTTTTGTTACATGTCCCTCTCAGTTTTCTCTTAGTGGTTCACCTAAAGATGGGTATTGCTGGGGTAGCTATAGCACTGGTTTTGACTAACCTCAACCTCATTCTCTTCCTATCCTCATTTGTATACTTTTCTGGTGTGTACAAAGAGTCATGGGTTTCACCAAGCATGAATTGCATCAAAGGGTGGTCCTCATTGCTTGCACTTGCTATTCCAACTTGTGTTTCAGTTTGCCTTGAGTGGTGGTGGTATGAGTTTATGATAATGTTGTGTGGTCTTCTAGTGAATCCAAAAGCAACCATTGCCTCAATGGGAATTCTTATTCAGACAACATCATTAGTCTATGTGTTCCCATCTTCACTTAGCCTTGGTGTTTCCACAAGAGTAGGGAATGAGTTAGGTGCTAATAGACCAAGCAAAGCAAGAATTGCAATGTTAGTGTCACTTTTTTGTGCTGTTGTATTAGGCCTTGGTGCAATGCTTTTTACCACCTTACTTAGGCACCAATGGGGAAGATTCTTCACCAATGACCATGAAATTCTTGAACTCACTTCCTTAGTGTTACCAATTGTTGGACTTTGTGAGCTCGGAAACTGTCCACAAACCACAGGTTGTGGAGTATTAAGGGGCTGTGCAAGACCTATTATAGGACTAAACATCAATTTGGGTTCATTTTATTTGGTGGGTATGCCAGTGGCCATCCTTCTTGGATTTGTGGCCAAATTGGGATTTGAAGGACTTTGGCTTGGGTTGCTTGCAGCACAAGTCTCATGTGGAGGGCTCATGTTGTTTGTTCTCTCAAGAACAGATTGGAATGTGCAAATAGAAAGAGCCAAAGAGATGACAAAAGATTCAACAATAACTACCACTTGTGCTGCTTCTAACTCTAAATTACTTGCATTCACAAAATCAGAGGAGAGCAAGAAAAATGCTCATGCTTGTGATCTTGAGGAGATAGTTATTGTTGATGATGAACTTACCAAGACATCTTCACTTGAAGCAGATCCATTTATCATACCACTTCCAAAAACACTTTGA 1656 0.4034 MCIPKLSSASPFLCPTKTHPKVLDAHPDDQVQHELHRWPTLTEALEEIKAIGKISGPTAITGLLLYSRAMISMIFLGYLGEMELAGGSLSIGFANITGYSVISGLAMGMEPICGQAYGAKQWKLLGLTLQRTILLLLSISIPISLTWLNMKTILLWLGQDQEISSMAQTFLHFSIPDLFLLSLLHPLRIYLRTQNITLPLTYCSAMSVLLHVPLSFLLVVHLKMGIAGVAIALVLTNLNLILFLSSFVYFSGVYKESWVSPSMNCIKGWSSLLALAIPTCVSVCLEWWWYEFMIMLCGLLVNPKATIASMGILIQTTSLVYVFPSSLSLGVSTRVGNELGANRPSKARIAMLVSLFCAVVLGLGAMLFTTLLRHQWGRFFTNDHEILELTSLVLPIVGLCELGNCPQTTGCGVLRGCARPIIGLNINLGSFYLVGMPVAILLGFVAKLGFEGLWLGLLAAQVSCGGLMLFVLSRTDWNVQIERAKEMTKDSTITTTCAASNSKLLAFTKSEESKKNAHACDLEEIVIVDDELTKTSSLEADPFIIPLPKTL 551
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal6g0434 551 CDD MATE_eukaryotic 47 483 IPR045069 GO:0042910|GO:1990961
Lal6g0434 551 TIGRFAM matE: MATE efflux family protein 63 454 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Lal6g0434 551 PANTHER MULTIDRUG RESISTANCE PROTEIN 28 501 - -
Lal6g0434 551 PANTHER PROTEIN DETOXIFICATION 28 501 - -
Lal6g0434 551 Pfam MatE 57 217 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Lal6g0434 551 Pfam MatE 278 440 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal6g0434 Lal-Chr6 2729532 2731749 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal6g0434 K03327 - gmx:100783792 818.535
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal6g0434 6 2729532 2731749 Lal6g0434 6 2729532 2731749 ECH