Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal6g0070 ATGGAGACTTCACTTTTCCAATTCTCTTCACTTTCGCCTCCATCATCTTCTTCTTCTTCTTCTTCATTTCTTTTCCTCCGTAAAAAACACTCCTTTCGGTTCACCAATGTCAAACACCCAACCAACTTCTCTATCCGTGCTTCATCCTCATCCGGGGATTCTGTTGTAACCCTGCTTGATTATGGTGCTGGCAATGTTCGAAGCGTTAGGAATGCTATCAGACACCTTGGCTTTGAGATTAAAGATGTTCGTTCTCCACAAGACATTTTGAATGCAAGCAAGCTAATATTTCCAGGTGTCGGAGCATTTGCCCCTGCCATGGATGTCTTGAAAAACACTGGGATGGCTGAAGCACTGTGTGCATATATTGAAAAGGATCGCCCATTTTTAGGAATTTGTCTTGGGCTTCAGTTACTTTTTGAATCTAGTGAGGAGAATGGTCCAGTAACGGGCCTTGGCTTGATACCTGGAACGGTTGGGCGATTTGATTCATCTAAAGGTTTCAGAGTACCACATATTGGCTGGAATGCTTTAAAAATCACAAAGGACTCAGAAATTTTGGATGATATTGGAAATCGCCATGTCTATTTTGTGCACTCGTATCGTGCCATGCCTTCAGATGAGAACAAAGAGTGGGTATCCTCCACCTGCGACTATGGTGACAAATTTATAGCATCTATTAGAAGAGGAAATGTGCATGCAGTTCAGTTCCATCCTGAAAAGAGTGGAGAAGTTGGTCTTTCTGTTTTGAGAAGATTCTTAAATCCAAAATCAAGCATAACAAAGAAGCCTGATGAAGGGAAAGCTTCAAAACTTGCACAGAGGGTGATTGCATGTCTTGACGTGAGGGCAAATGATAACGGGGACCTAGTTGTAACCAAAGGAGATCAGTATGATGTAAGAGAAAATACAAACGAAAACGAGGTAAGGAATCTTGGCAAGCCAGTTGAGCTTGCTGGACAATACTACATAGATGGAGCAGATGAGGTCAGCTTCCTGAATATTACTGGCTTTCGCGACTTCCCTCTTGGTGATTTGCCAATGTTGCAGGTATTGCGACACACATCAGAAAATGTTTTTGTACCCTTAACAGTTGGGGGTGGAATTAGAGATTTTACAGATTCAACCGGCAGGCATTATTCTAGTTTGGAAGTTGCTTCAGAATATTTTAGATCTGGGGCTGATAAGATTTCGATTGGAAGTGACGCGGTTTATGCTGCAGAAGAATATCTAAAATCCGGAGTAAAAACTGGGAAGACCAGCTTAGAGCAGATATCTAGAGTTTATGGGAATCAGGCAGTGGTTGTTAGTATTGATCCTCGTAGGGTGTATGTAAAGGATCCCCAAGGTGTGCAATTCAAGACTGTAAGGGTGTCAACTCTAGGTCCAAATGGAGAAGAATACGCCTGGTATCAGTGTACAGTAAGTGGGGGGCGAGAAGGCCGACCTATTGGTGCTTATGAACTAGCAAAGGCAGTTGAAGAGCTTGGTGCTGGAGAAATACTACTTAACTGTATTGACTGCGACGGTCAAGGGAAAGGATTTGATACAGATTTAGTTGAGTTGATCTCAGATGCTGTAAGTATCCCTGTGATTGCAAGTAGTGGTGCTGGTTCTGTTGAACACTTCTCCCAGGTGTTTACTAAAACCAATGCATCTGCTGCACTTGCTGCTGGCATTTTTCATAGAAAGGAGGTGCCTATTCGATCCGTAAAGGAGCATTTGTTGAAGGAAGGGATAGAAGTCCGAATCTGA 1755 0.4285 METSLFQFSSLSPPSSSSSSSSFLFLRKKHSFRFTNVKHPTNFSIRASSSSGDSVVTLLDYGAGNVRSVRNAIRHLGFEIKDVRSPQDILNASKLIFPGVGAFAPAMDVLKNTGMAEALCAYIEKDRPFLGICLGLQLLFESSEENGPVTGLGLIPGTVGRFDSSKGFRVPHIGWNALKITKDSEILDDIGNRHVYFVHSYRAMPSDENKEWVSSTCDYGDKFIASIRRGNVHAVQFHPEKSGEVGLSVLRRFLNPKSSITKKPDEGKASKLAQRVIACLDVRANDNGDLVVTKGDQYDVRENTNENEVRNLGKPVELAGQYYIDGADEVSFLNITGFRDFPLGDLPMLQVLRHTSENVFVPLTVGGGIRDFTDSTGRHYSSLEVASEYFRSGADKISIGSDAVYAAEEYLKSGVKTGKTSLEQISRVYGNQAVVVSIDPRRVYVKDPQGVQFKTVRVSTLGPNGEEYAWYQCTVSGGREGRPIGAYELAKAVEELGAGEILLNCIDCDGQGKGFDTDLVELISDAVSIPVIASSGAGSVEHFSQVFTKTNASAALAAGIFHRKEVPIRSVKEHLLKEGIEVRI 584
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal6g0070 584 PIRSF IGPS_HisHF 53 584 IPR014640 GO:0000105|GO:0000107|GO:0016763|GO:0016833
Lal6g0070 584 SUPERFAMILY Ribulose-phoshate binding barrel 271 583 IPR011060 -
Lal6g0070 584 Pfam Glutamine amidotransferase class-I 58 253 IPR017926 -
Lal6g0070 584 TIGRFAM IMP_synth_hisH: imidazole glycerol phosphate synthase, glutamine amidotransferase subunit 56 254 IPR010139 GO:0000105|GO:0016763
Lal6g0070 584 ProSiteProfiles CobBQ-type GATase domain profile. 53 246 - -
Lal6g0070 584 SUPERFAMILY Class I glutamine amidotransferase-like 55 255 IPR029062 -
Lal6g0070 584 Hamap Imidazole glycerol phosphate synthase subunit HisH [hisH]. 55 256 IPR010139 GO:0000105|GO:0016763
Lal6g0070 584 Gene3D - 51 276 IPR029062 -
Lal6g0070 584 Gene3D Aldolase class I 277 584 IPR013785 -
Lal6g0070 584 PANTHER IMIDAZOLE GLYCEROL PHOSPHATE SYNTHASE HISHF 67 584 - -
Lal6g0070 584 CDD GATase1_IGP_Synthase 56 254 IPR010139 GO:0000105|GO:0016763
Lal6g0070 584 TIGRFAM hisF: imidazoleglycerol phosphate synthase, cyclase subunit 272 583 IPR004651 GO:0000105|GO:0000107
Lal6g0070 584 MobiDBLite consensus disorder prediction 1 21 - -
Lal6g0070 584 PANTHER IMIDAZOLE GLYCEROL PHOSPHATE SYNTHASE SUBUNIT HISF/H IGP SYNTHASE SUBUNIT HISF/H 67 584 - -
Lal6g0070 584 ProSiteProfiles Glutamine amidotransferase type 1 domain profile. 55 263 - -
Lal6g0070 584 Pfam Histidine biosynthesis protein 275 566 IPR006062 GO:0000105
Lal6g0070 584 CDD HisF 275 578 IPR004651 GO:0000105|GO:0000107
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal6g0070 K01663 - gmx:100500353 969.918
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal6g0070 6 416959 424138 Lal6g0070 6 416959 424138 ECH