Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal6g0051 ATGAGGCAAAACAGCAGCAACGCTAAAACTTCCGAATCTGGTTTCTTAAGCACCATTTCCTCCTCTTCCATCAAAAACCTTCTTTCTAAATCTTTCTCTTCCAATTTCAACCGCAAATCATCATCTTCTTCATTCCCAAACGAAAACACCCCTCCCACTCATCCCAACATTCAGATCGACCTTGACCATTCCTCCAAGCATCAATTGCGATCCCAAACCCCAATTTCGACCAATGATGAAAAAGTCACCCAATCGGAATTGGATCCATCGGTTGTGGTACGAATTAGACCTAGCAACACAGGCGAAAGAGAGGGGGAACAAACGGTTAAGAAGGTTTCTTATGATACCTTGTGTGTTGGGGATAGGCAATTTACATTTGATTCAGTTTTCGACTCGAGTTCCAATCAGGAAGATATTTTTCAGACAGTGGGTGTTCCCTTGGTTAAAAATGCTATAGCTGGTTACAATACTTCAGTTCTATCATATGGCCAGTCTGCAAGTGGAAAAACTTATACAATGTGGGGTCCCCCAAGTGCAATGTTTGAGGAGCCCTCACTGCAAAGTCATAAGGGAGTTGTTCCTCGGATCTTCCAAATGTTATTTTCTGAGCTTGAAAGAGAGCAGCAGATGTCTGGGGGGAAACAGTTCAACTATCAATGCCGATGTTGTTTTCTTGAGATATACAATGAACAAATAGGGGATTTACTTGATCCAACACAACGTAACCTGGAGATGAAGGATGGCTCCAAACATGCTTTGTATATAGATAATCTCACTGAGGAATATGTCACTAGCTATGATGATGTAACACAAATTCTGATTAAGGGCCTTTCAAGCAGAAAAGTTGGAGCAACAAGCTTAAATTCTAAGAGCTCTAGATCACATATCATTTTCACATTTGTGATCGAGTCTTGGTGTAAGGGAATCTCATCAAGTGGTTTCAGTAGTTCCAAAACTAGCAGAATTAGCCTCATTGATCTTGCTGGATTGGACAGGAACAAAGTTGATGATGCTGGCAGACAACATCTAAAGGAAAAAAAAAATGTAAAGAAGTCCTTATCTCAGCTTGGGCACTTAGTTGATACTCTGACTAAAAAAACTCACTCAGGAAAAGCTGAACAAATTCCAAATGGGAATTCCTGTTTAGAACGTTTACTACAAGAATCACTTGGTGGAAATGCCAAACTCTATGTAATCTGTTCCATATCTCCAGATAACAAGAATAATGGTGAATCATTGCACACACTCAGATTTGGTCAGCGAGTAAGATCCATTAGAAATGAGCCAGTTATCAATGAAATAAAGGAGGATGATGTGAATGATTTGAGTGATAAAATCCGGCTTCTGAAGGAAGAACTAATCAGAGCAAAAGCAGATAGTCATAGCTCAGTTGGTGGTATAAATGGATACTTTCAAGGTCATAATGTACGGGAAAGCCTTAATCAGTTGAGAGTCAGCTTAAGTCGATCTCTACTCCTACCTCACATTGATAACACCACTGATGAAGTGGTGCATGCGGATGAGGAGGATATAAGGCAATTACGACAGCAGATAGATGAACTGTATGGTTCATGTGAAGAGAATCCTAAAGAGATATCTGTCGGTGAAGATTGTGTCCAGTATTATTCCGTTGAGGAAAGTTGTGACGCTGATAAGATCAGTGACAATGAAGTTGAGAAAGAGGAAGTATGTTATGGAGAAATGTTGAGTAAACTTCATCATGAGGACAGTGTGCTATCAGGTAGCACCTTGTATGCATCGGTAGATGACCTTGAATCCATATCTAGCACCTCAAGGGCAATTAAATCCACATCCAGAAACAGTATTTCGGTTAGTTCATGCTACCGATCGTCCATACTTGAGGAACCACCGTTATCTGAGTCTCCAAAGATCGGGAATACCAAGAGGAAAAGCCAAATATCATTTTCATCGAGTTGTCTTGGAAGTTGGAACAATGTGGCAGAGGAGAAATTGAGTTCCAATCAAGATATGTTGGGACAATCATTTATACAAGGTGATCATTTACGATCCTCATTACGGTCAAGTAAGGTTTTACCAGGCCCGACAGAGTTATTGGCAACAAGCCTTCAGAGGGGATTACAGATAATTGATTATCACCAGCAGAACTCATCACTAACCAAATCTTCAGCTTCCTTCTCTTTTGGGCGTTCAACCTTGATACCTTGTCCAGAAATAGACAAGGATGAGAAATCTTCAATTGATGAAAGAAATGCTCATTTGCTTTGTGAATCTTGCCATAAAAAAATATCAGATTATAGTGAGGTCCGAAACAGCTTGAAGTCAAGTATTGACACAGTTAAAGTTCCAAAAGATTTTGAAAATGTAATGGCGAAAGCAATCTTAAGAGAAAAGGAGCTTGAGAATGTTTGCAAGGAGCAAGCAGCTAGAATTGAGGAACTAAATCAAATGGTGGAGAGTTTGAAAGGAGAAAAAGAACTAGACTCTGTCATTGTGTATGGTCAAAAAAACAGCAAGCAGACTACACATCAAGAAGAGCATAATAACGCACAGAAAGATGAAGAAAAGCTTCGGATTGGCACTTCCTCGGTCGGTCTTTTAACAGATATTGTAGAGGAAAAATGTGACATTAAAGAAGTCCAGGAAGAATTAGCACGAGGAGTCAGCTCTTTTGATGTTACTGAGAAAGAAGAACTGCTTAAGGAAATTCAAAATCTAAGAAGCAAGCTTCAACTATGTAGCGATGCACCAGTTAAAAAGTCCACTGACAGACTGAGATCTTCATTAATGTCAAGATCCATTCAACTGCAAAAAAGTGGTGTGTTTTTCCATGATAATGGTGGGGAAGAGCTAGAAAAAGAAAGACAGATATGGACAGAAATGGAGAGTGAGTGGATTTGTCTTACTGATGAACTAAGAGTTGATCTTGATGCCATTCGCCAGCAAGCAGAGAGGGTGGAACTGGAACTGAGGTTAGAGAAGAAGTGCACCGAGGAGTTGGATGATGCACTAAAAAGATCTGTTCTTGGACATGCTAGAATGGTAGAACACTATGCTGACCTCCAAGAAAAATATAACGACTTGGTTACAAAGCACAATGCTATAATGCAAGGCATAGCAGAGGTGAAGAAGGCAGCAGAAAAGGCTGGAAAAAAGGGCCATGCTCGCTTTGCCAAGTCTCTTGCTGCCGAGCTTTCTGCATTGAGGGTTGAGAGAGAAAGAGAAGCAAAATTCTTGAAAAAGGAGAACGTGAGTCTCAAGATTCAACTTAGAGACACTGCAGAAGCTGTTCATGCAGCTGGAGAACTACTTGTAAGACTGAGAGAAGCTGAGCATGCAGCATCTGCTGCAGAGGAGAATTTCACAAGAGTGGAACAAGATAATGAAAAGCTTAGAAAGCAAATGGAGAAGCTAAAAAGAAAGCACAAGATGGAGACGATTACGATGAAACAGTATCTAGCAGAGAGCAAATTACCAGAATCTGCACTCAAACAACTATATAGAGAAGAGTCTGATGTAGCAGTACACAACAATGCAGATGATGATCAAGCATGGAGAGCAGAATTTGGAGCAATCTATCAAGAGCATTATTAG 3573 0.4025 MRQNSSNAKTSESGFLSTISSSSIKNLLSKSFSSNFNRKSSSSSFPNENTPPTHPNIQIDLDHSSKHQLRSQTPISTNDEKVTQSELDPSVVVRIRPSNTGEREGEQTVKKVSYDTLCVGDRQFTFDSVFDSSSNQEDIFQTVGVPLVKNAIAGYNTSVLSYGQSASGKTYTMWGPPSAMFEEPSLQSHKGVVPRIFQMLFSELEREQQMSGGKQFNYQCRCCFLEIYNEQIGDLLDPTQRNLEMKDGSKHALYIDNLTEEYVTSYDDVTQILIKGLSSRKVGATSLNSKSSRSHIIFTFVIESWCKGISSSGFSSSKTSRISLIDLAGLDRNKVDDAGRQHLKEKKNVKKSLSQLGHLVDTLTKKTHSGKAEQIPNGNSCLERLLQESLGGNAKLYVICSISPDNKNNGESLHTLRFGQRVRSIRNEPVINEIKEDDVNDLSDKIRLLKEELIRAKADSHSSVGGINGYFQGHNVRESLNQLRVSLSRSLLLPHIDNTTDEVVHADEEDIRQLRQQIDELYGSCEENPKEISVGEDCVQYYSVEESCDADKISDNEVEKEEVCYGEMLSKLHHEDSVLSGSTLYASVDDLESISSTSRAIKSTSRNSISVSSCYRSSILEEPPLSESPKIGNTKRKSQISFSSSCLGSWNNVAEEKLSSNQDMLGQSFIQGDHLRSSLRSSKVLPGPTELLATSLQRGLQIIDYHQQNSSLTKSSASFSFGRSTLIPCPEIDKDEKSSIDERNAHLLCESCHKKISDYSEVRNSLKSSIDTVKVPKDFENVMAKAILREKELENVCKEQAARIEELNQMVESLKGEKELDSVIVYGQKNSKQTTHQEEHNNAQKDEEKLRIGTSSVGLLTDIVEEKCDIKEVQEELARGVSSFDVTEKEELLKEIQNLRSKLQLCSDAPVKKSTDRLRSSLMSRSIQLQKSGVFFHDNGGEELEKERQIWTEMESEWICLTDELRVDLDAIRQQAERVELELRLEKKCTEELDDALKRSVLGHARMVEHYADLQEKYNDLVTKHNAIMQGIAEVKKAAEKAGKKGHARFAKSLAAELSALRVEREREAKFLKKENVSLKIQLRDTAEAVHAAGELLVRLREAEHAASAAEENFTRVEQDNEKLRKQMEKLKRKHKMETITMKQYLAESKLPESALKQLYREESDVAVHNNADDDQAWRAEFGAIYQEHY 1190
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal6g0051 1190 SMART kinesin_4 91 433 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lal6g0051 1190 Coils Coil 962 982 - -
Lal6g0051 1190 Coils Coil 1055 1075 - -
Lal6g0051 1190 PRINTS Kinesin heavy chain signature 154 175 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lal6g0051 1190 PRINTS Kinesin heavy chain signature 285 302 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lal6g0051 1190 PRINTS Kinesin heavy chain signature 321 339 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lal6g0051 1190 PRINTS Kinesin heavy chain signature 375 396 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lal6g0051 1190 MobiDBLite consensus disorder prediction 34 86 - -
Lal6g0051 1190 MobiDBLite consensus disorder prediction 34 59 - -
Lal6g0051 1190 PANTHER KINESIN-LIKE PROTEIN KIN-12F 76 1190 - -
Lal6g0051 1190 ProSiteProfiles Kinesin motor domain profile. 88 425 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lal6g0051 1190 PANTHER CENTROMERE PROTEIN E 76 1190 - -
Lal6g0051 1190 Coils Coil 790 817 - -
Lal6g0051 1190 Coils Coil 432 459 - -
Lal6g0051 1190 MobiDBLite consensus disorder prediction 68 85 - -
Lal6g0051 1190 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 91 457 IPR027417 -
Lal6g0051 1190 Pfam Kinesin motor domain 110 425 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lal6g0051 1190 Coils Coil 1093 1141 - -
Lal6g0051 1190 Coils Coil 889 909 - -
Lal6g0051 1190 Gene3D Kinesin motor domain 88 465 IPR036961 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal6g0051 Lal-Chr6 315668 321466 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal6g0051 90 425 Miscellaneous Gene Families AT4G39050 35.484 7.49e-48 184
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal6g0051 K10400 - gmx:100806960 1626.3
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal6g0051 6 315668 321466 Lal6g0051 6 315668 321466 ECH
Lal18g1599 18 17482711 17492687 Lal6g0051 6 315668 321466 LSH
Lal3g0820 3 7501028 7508108 Lal6g0051 6 315668 321466 PCT
Lal18g1599 18 17482711 17492687 Lal6g0051 6 315668 321466 PCT
Lal6g0051 6 315668 321466 Lal3g0820 3 7501028 7508108 PCT
Lal6g0051 6 315668 321466 Lal18g1599 18 17482711 17492687 PCT