Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal6g0037 ATGTTAGTGGGAAGAAGAAGCAGAGGCGGTGTTGGTGCCACTGCCATATTGGCATCAGTGATATTGGGTTACTTCATCTGTAATTATTGTTGGAAGAAAAAATTAGTTAATAAGAAAAAGAGGAAAAATGGATTGGTGGATGCCATTGGTAACACCCCTTTGATTCAAATCAACAGTCTCTCTAATGCTACGGGTTGCCAAATTCTTGGCAAGTGCGAGTTTTTGAATCCTGGAGGGAGTGTCAAAGATAGGGTTGCACTCCAAATTATTCAAGAGGCTCTGGAATCTGGGCAACTACGTCGGGGTGGAATAATTACTGAAGGGAGTGCTGGAAGCACTGCCATTAGTATTGCCACTGTTGCTCCTGCCTTCGGATGCAAATGCCACGTGGTTATACCTGATGATGCTGCCATTGAGAAGTCTCAAATAATTGAAGCCCTTGGGGCAACTGTTGAAAGAGTTCGACCAGTTTCCATTACTCACAAAGACCATTTTGTCAATATTGCACGTAGACGGGCATCCGAAGCAAATGATTTTGCATTGAAGAATAGAAAATCACAATTAAATGGCAAAGACACAAAGCAAGTAAATGGTCACGAATCTGATGGATACATACACAATTCATTCTTTTCTAATGATTGTCAAGGCGGGTTTTTCGCTGATCAGTTTGAGAACCTAGCAAACTTCAGGGCTCATTATGAGGGTACAGGACCTGAGATTTGGGAACAGACGAGTGGAAAGTTGGATGCATTTGTTGCCGCGGCAGGCACTGGTGGTACTGTGGCAGGAGTTTCCAGGTTTCTCCAGGAAAAGAATCCAAATGTCAAGTGCTACCTCCTAGATCCTCCTGGTTCCGGTTTGTTTAACAAGGTAACAAGGGGAGTAATGTACACCAAAGAGGAGGCAGAAGGTCGTAGACTTAGAAATCCATTTGACACTATAACCGAAGGAATTGGAATTAACAGAATAACAAAGAATTTTGCAGAGGGAAAACTCGATGGTGCTTTTCGAGGCACAGATATGGAGGCTGTTGAAATGGCTAGGTTTCTTTTGAAGAACGATGGTCTCTTCCTCGGGAGTTCTTCCGCAATGAACTGTGTTGGAGCAGTTAGAGTAGCACAGTCGCTTGGCCCAGGTCACACAATTGTAACCATTCTTTGTGACAGCGGAATGAGACATTTGAGCAAGTTCTATAACTCTGAGTACTTGTCTCAGCTTGGGTTGACACCTAAAGCAACTGCATTAGAGTTCTTGGGCATCAAATGA 1266 0.4344 MLVGRRSRGGVGATAILASVILGYFICNYCWKKKLVNKKKRKNGLVDAIGNTPLIQINSLSNATGCQILGKCEFLNPGGSVKDRVALQIIQEALESGQLRRGGIITEGSAGSTAISIATVAPAFGCKCHVVIPDDAAIEKSQIIEALGATVERVRPVSITHKDHFVNIARRRASEANDFALKNRKSQLNGKDTKQVNGHESDGYIHNSFFSNDCQGGFFADQFENLANFRAHYEGTGPEIWEQTSGKLDAFVAAAGTGGTVAGVSRFLQEKNPNVKCYLLDPPGSGLFNKVTRGVMYTKEEAEGRRLRNPFDTITEGIGINRITKNFAEGKLDGAFRGTDMEAVEMARFLLKNDGLFLGSSSAMNCVGAVRVAQSLGPGHTIVTILCDSGMRHLSKFYNSEYLSQLGLTPKATALEFLGIK 421
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal6g0037 421 Pfam Pyridoxal-phosphate dependent enzyme 47 388 IPR001926 -
Lal6g0037 421 SUPERFAMILY Tryptophan synthase beta subunit-like PLP-dependent enzymes 35 402 IPR036052 -
Lal6g0037 421 Gene3D - 203 403 IPR036052 -
Lal6g0037 421 ProSitePatterns Cysteine synthase/cystathionine beta-synthase P-phosphate attachment site. 71 89 IPR001216 GO:0006535
Lal6g0037 421 Gene3D - 79 181 IPR036052 -
Lal6g0037 421 PANTHER CYSTEINE SYNTHASE-RELATED 31 420 - -
Lal6g0037 421 PANTHER CYSTATHIONINE BETA-SYNTHASE 31 420 - -
Lal6g0037 421 CDD CBS_like 50 395 - -
Lal6g0037 421 Gene3D - 49 78 IPR036052 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal6g0037 Lal-Chr6 256728 258865 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal6g0037 42 395 Miscellaneous Gene Families AT3G04940 28.933 1.21e-33 126
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal6g0037 K01738 - gmx:100799081 674.855
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal6g0037 6 256728 258865 Lal6g0037 6 256728 258865 ECH