Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal5g1797 ATGGCATACACTAACATGAGCTTAAACGTAGAGACACCAATCACTCATATCGAAAAAGAAGAAGAAGAAGAAGAAGATGAAGTATCTCCAATTGAAGAAGTTCGTTTAACAGTGACCAACACTGATGACCCCACCCAACCCATATGGACTTTCCGTATGTGGTTCCTGGGTCTACTCTCATGTTCACTATTATCATTCCTAAACCAATTCTTCTCTTACCGTACGGAACCACTTGTTATAACACAAATAACCGTTCAGATAGCAACACTCCCTATCGGCCACTTCATGGCGGCGGTGCTGCCTTCACGTAAGTTCACAATAGCTGGGTTCGGGTCGAAGATGTTTTCGTTAAACCCGGGTCCGTTTAACATGAAGGAGCACGTGTTGATTACTATATTTGCGAATGCGGGAAGCGCGTTTGGGTCAGGTTCGCCGTATGCGGTTGGGATAGTTAATATCATTAAGGCCTTTTATCGACGGAGTATCTCTTTTCCTGCTGCTTGGCTTCTCATTATCACCACTCAGGTGCTAGGATACGGGTGGGCCGGGTTGTTGAGGAAGTACGTGGTGGAACCAGCCCATATGTGGTGGCCTAGCACCCTCGTTCAGGTCTCACTCTTCAGAGCTTTGCATGAGAAAGATGACCACAGACTTTCAAGAGGAAAGTTTTTCTTTATTGCACTAGTGTGCAGTTTTTCGTGGTATGTGTTACCTGGATACTTATTCACAACTCTCTCAAACATATCATGGGTTTGTTGGATATTCTCCAAGTCAGTCACAGCTCAGCAGATAGGGTCAGGCATGAAAGGCTTAGGACTTGGTGCATTCACACTTGATTGGTCTGCAGTGGCATCATTCTTGTTCAGCCCTCTTATCTCACCCTTCTTTGCCATTGTCAATGTTTTTATGGGCTATGCTTTAATAGTCTATGTTGTGATTCCTATAGCGTACTGGGGTCTGAATGTGTACAGTGCAAATCACTTTCCCATTTTCTCATCACACTTGTTCACAGAACAAGGCCAGCTTTACAACATATCTGCTATTGTCAATGACAAGTTTGAGTTGAATGTTGAGCAATATCAAGAGCAAGGTAGGATTCATCTAAGTATGTTTTTTGCTCTCACCTATGGCTTTGGATTTGCCACCGTAGCATCCACCCTTACACATGTTGCTTGCTTCTATGGAAGGGAGATTGTGGAGCGCTATCGTGCTTCTTCCAGCGGAAAAGAAGATATCCACACGAGACTGATGAGAAGATACAAAGACATACCCTCTTGGTGGTTTTATGTGTTGCTGGCTGTGACGCTTGTGGTTTCTCTCTTACTAAGCATATTTCTGAATGATCAAGTTCAAATGCCATGGTGGGGACTTCTCTTTGCTGGTGCCATTGCTTTTGTGTTTACCCTCCCAATTAGCATCATCACTGCCACCACAAACCAGACACCAGGGTTGAATATCATCACAGAGTATGTCTTTGGTCTCGTTTACCCTGGAAGACCAATAGCAAATGTATGCTTCAAAACCTATGGTTACATAAGCATGGCTCAGGCTGTTTCATTCCTCAGCGATTTCAAGCTTGGCCACTACATGAAAATCCCTCCAAGATCAATGTTCTTAGTTCAGTTCATAGGTACAATACTTGCTGGAACCATCAATATTGGTGTAGCATGGTGGTTGCTGAACTCAATCGAAAACATATGTCAGGATACTCTCCTTCCTGAAGGAAGTCCTTGGACATGCCCCAGCGACCGTGTTTTCTTTGATGCATCAGTTATTTGGGGTCTGGCAGGACCAAAGAGGATGTTTGGTTCTCAAGGTATATACAGTGCAATGAATTGGTTTTTCGTTGGAGGTGCAATAGGTCCTGTAATTGTTTGGCTATTGCATAAGGCATTTCCAAAACAGTCATGGATTCGTCTAATTAACCTTCCGGTTCTACTTGGAGCAACTGGTATTATGCCCCCAGCAACAGCATTGAACTTCAATGCATGGATTGTTGTTGGAACAATTTTCAACTTCTTTATCTTTCGTTACAGGAAGAAGTGGTGGCAGAGATACAACTATATTCTATCAGCAGCACTTGATGCTGGTGTTGCATTTATGACTGTGTTACTATACTTTTCACTAGGTCTAGAAAATAAAAGCATTACTTGGTGGGGTACTGATGGTGAACATTGTCTATTGGCATCTTGCCCAACTGCAAAGGGTGTAGTGGTTGATGGTTGCCCATCAAACTAA 2238 0.4334 MAYTNMSLNVETPITHIEKEEEEEEDEVSPIEEVRLTVTNTDDPTQPIWTFRMWFLGLLSCSLLSFLNQFFSYRTEPLVITQITVQIATLPIGHFMAAVLPSRKFTIAGFGSKMFSLNPGPFNMKEHVLITIFANAGSAFGSGSPYAVGIVNIIKAFYRRSISFPAAWLLIITTQVLGYGWAGLLRKYVVEPAHMWWPSTLVQVSLFRALHEKDDHRLSRGKFFFIALVCSFSWYVLPGYLFTTLSNISWVCWIFSKSVTAQQIGSGMKGLGLGAFTLDWSAVASFLFSPLISPFFAIVNVFMGYALIVYVVIPIAYWGLNVYSANHFPIFSSHLFTEQGQLYNISAIVNDKFELNVEQYQEQGRIHLSMFFALTYGFGFATVASTLTHVACFYGREIVERYRASSSGKEDIHTRLMRRYKDIPSWWFYVLLAVTLVVSLLLSIFLNDQVQMPWWGLLFAGAIAFVFTLPISIITATTNQTPGLNIITEYVFGLVYPGRPIANVCFKTYGYISMAQAVSFLSDFKLGHYMKIPPRSMFLVQFIGTILAGTINIGVAWWLLNSIENICQDTLLPEGSPWTCPSDRVFFDASVIWGLAGPKRMFGSQGIYSAMNWFFVGGAIGPVIVWLLHKAFPKQSWIRLINLPVLLGATGIMPPATALNFNAWIVVGTIFNFFIFRYRKKWWQRYNYILSAALDAGVAFMTVLLYFSLGLENKSITWWGTDGEHCLLASCPTAKGVVVDGCPSN 745
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal5g1797 745 TIGRFAM ISP4_OPT: small oligopeptide transporter, OPT family 27 713 IPR004648 GO:0055085
Lal5g1797 745 PANTHER ISP4 LIKE PROTEIN 21 744 IPR004648 GO:0055085
Lal5g1797 745 PANTHER OLIGOPEPTIDE TRANSPORTER 4 21 744 - -
Lal5g1797 745 TIGRFAM OPT_sfam: oligopeptide transporter, OPT superfamily 32 711 IPR004813 GO:0035673
Lal5g1797 745 Pfam OPT oligopeptide transporter protein 49 708 IPR004813 GO:0035673
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal5g1797 Lal-Chr5 19884667 19890750 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal5g1797 17 743 Organic Solute Cotransporters AT5G64410 80.193 0.0 1243
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal5g1797 - - gmx:100811348 1315.06
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal5g1797 5 19884667 19890750 Lal5g1797 5 19884667 19890750 ECH