Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal5g1785 ATGAGTGTCTCACTATCTCGCAGCACAAACACAATTCACAGATCTGGGTCTCAACAGATCTATCCAACTTGTTTCAGCATCAGCAGTCTAATTGCTGTTATAATGTCAAGAAGACCAGTAAATCCTACACGTCGGTTAGGAGATGGTGGAAGTATACCATTTGTGGCCACTATTCAGGATAAATCTCGCAACTCTCCCCTACTATCTATTGGGCTTGTTGTCGTGGGTGCAATCCTTTTGATCGGTTATTGTTATAGCAGCTCAGGTGGAGCTAGTAGTGGTATTAAGGATGTAAGTAAACTTGAAGGTGGTGCTTCATGCACAGCAGAAGTACTACAAGCATTGCCCGTTTTGAAGAAAGCATATGGAGACAGCTTGCATAAAGTTTTGCATGTTGGCCCTGACTCTTGTTCTTTGGTATCTAGTTTGTTAAAAGAAGAGGATACCGAGGCTTGGGGAATAGAACCATATGAGTTAGATGATGTTAGTGCAAAGTGCAAGAAACTTGTACGCAAGGGAGTTGTGCGCGTAGCTGACATAAAGTTTCCTCTGCCTTATCGTCCAAAGTCATTTTCTCTTGTCATTGTGTCAGATGCATTGGATTACTTATCTCCAAGATACCTGAATAAAACCCTGCCAGAGTTGGCAAGGGTATCTTCTGATGGCATTGTCATCTTTTCGGGTTATCCAGGTCAGCAGAGAGCTAGAGGTGGAGAAGTGGCCAAATTTGGTCGTCCAGCCAAATTACGCAGCTCATCGTGGTGGATAAGGTTTTTTGTTCAGAGTAGCTTAGAAGAGAATGAAAGTGCAATAAAGAAGTTTGAGCAGGCTTCAACCAAGAGGGCATACAAACCAGCTTGCCAAGTTTTTCACCTCAAATCATACCCTTGA 891 0.4299 MSVSLSRSTNTIHRSGSQQIYPTCFSISSLIAVIMSRRPVNPTRRLGDGGSIPFVATIQDKSRNSPLLSIGLVVVGAILLIGYCYSSSGGASSGIKDVSKLEGGASCTAEVLQALPVLKKAYGDSLHKVLHVGPDSCSLVSSLLKEEDTEAWGIEPYELDDVSAKCKKLVRKGVVRVADIKFPLPYRPKSFSLVIVSDALDYLSPRYLNKTLPELARVSSDGIVIFSGYPGQQRARGGEVAKFGRPAKLRSSSWWIRFFVQSSLEENESAIKKFEQASTKRAYKPACQVFHLKSYP 296
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal5g1785 296 PANTHER S-ADENOSYL-L-METHIONINE-DEPENDENT METHYLTRANSFERASE-RELATED 35 296 IPR044689 GO:0008168|GO:0045488
Lal5g1785 296 CDD AdoMet_MTases 128 229 - -
Lal5g1785 296 PANTHER S-ADENOSYL-L-METHIONINE-DEPENDENT METHYLTRANSFERASE-RELATED 35 296 - -
Lal5g1785 296 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 127 264 IPR029063 -
Lal5g1785 296 Gene3D Vaccinia Virus protein VP39 117 286 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal5g1785 Lal-Chr5 19786435 19790774 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal5g1785 K23871 - gmx:100800870 461.07
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal5g1785 5 19786435 19790774 Lal5g1785 5 19786435 19790774 ECH
Lal5g1785 5 19786435 19790774 Lal3g0053 3 311305 314843 LSH