Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal5g1192 ATGGTTTTATACCTCTCCATCATGAAAGGAATGCAAAGGGGGGAACTAAAACCACTTCATGATGGATATAAGTATTGCAAGGAACATGCTCAGAAATGGCCACACAATGTGGCTGCCCATGGTTCAAGGTGGGGCTTTCACAGACTCACATCTTCCTATCAATCTCTTCCTGCAGAGTATCCAAGAAGAGCATTTGTCTGTAGAACATATTCTCTGACGAGTAGTTTAGAGGAATCTGCATCGTTACAACCATGTACCACTGAGCAGATAACAGCACTGCTTGCTGATACTGAAAGATCAAAACTCACTAAGAAGCTTAGTGAAGCAAACCAGCAAAATCGGTTCCTTAAAAGACAGTTGCATATAAAGGAGGAAGCATTGGTAAAATTTAAAAGTGAACTTGCTGTCATGGGGCTTGAAGTTCAGGCTTTGGCCAGATTAGCAGGAGAAATAGCTCAATCTGGCATTCCACAAGGTGCAAGGAAGATCAATGGGAAGTACATTCATTCTCACCTTGTTGCTCGGTTAGAAGCTGTACATGAACAATTGAAGGAACAAATAAAGGATGTTGATGCGGCACAATCCAAGCAGATTTCAGTATTTTGGGTTGGCATGGCCGAGAGTGTGCAAGTTATGGGTAGTTTTGATGGTTGGAGCCAAGGAGAACACTTATCACCTGAGTATACTGGTTCTTACACCAGATTCTCAACAACATTGATGCTTAGGCCAGGAAGGTATGAAATCAAGTTCTTTGTAGATGGTGAATGGCATCTATCACCAGAGTTCCCTATAATTGGTGATGGGTTAACAAAAAACAATTTACACAAAGCCATGAAGAAGAGTGGTCCTGATAAGAACAGGAACAACAACAACAAGGGAACCGATGAGAATCAGAAAAATAGGAACATCAATAGGTTCTTGATCACTATCAACTTTCTTGGGAGTTCTGGACCTGTAAGGTTTGTGGTGAATATGAAAGATCTTGTTTCTGGGGTCATTGAAAGGGCTCTCAAATATTATGCCCGAGAAGGGAGGGTTCCTGTTCTAGGGTTTGATGCCACTAATTTCCTTCTTTACCCTGCAAATGCATGTTGTGATGCTCTGAATCCATTGGAACCCATAGGATCTTATGGTGCTAGGAACTTTGTGCTGTGCAAAAAGAAGGTATGTTCTACAATGACAGAACCACAGTCAAAACTTATCTCTCAAAAGAGCAATGGTGGATGGAAAGCATGGTTAAACAAATCATTTAGCTTTAAAGTCTTATCCCATTGA 1275 0.4118 MVLYLSIMKGMQRGELKPLHDGYKYCKEHAQKWPHNVAAHGSRWGFHRLTSSYQSLPAEYPRRAFVCRTYSLTSSLEESASLQPCTTEQITALLADTERSKLTKKLSEANQQNRFLKRQLHIKEEALVKFKSELAVMGLEVQALARLAGEIAQSGIPQGARKINGKYIHSHLVARLEAVHEQLKEQIKDVDAAQSKQISVFWVGMAESVQVMGSFDGWSQGEHLSPEYTGSYTRFSTTLMLRPGRYEIKFFVDGEWHLSPEFPIIGDGLTKNNLHKAMKKSGPDKNRNNNNKGTDENQKNRNINRFLITINFLGSSGPVRFVVNMKDLVSGVIERALKYYAREGRVPVLGFDATNFLLYPANACCDALNPLEPIGSYGARNFVLCKKKVCSTMTEPQSKLISQKSNGGWKAWLNKSFSFKVLSH 424
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal5g1192 424 Pfam Glycogen recognition site of AMP-activated protein kinase 200 269 IPR032640 -
Lal5g1192 424 Coils Coil 99 126 - -
Lal5g1192 424 Coils Coil 173 196 - -
Lal5g1192 424 Gene3D Immunoglobulins 188 276 IPR013783 -
Lal5g1192 424 MobiDBLite consensus disorder prediction 275 294 - -
Lal5g1192 424 CDD E_set_AMPKbeta_like_N 202 274 - -
Lal5g1192 424 PANTHER PROTEIN PTST, CHLOROPLASTIC 70 274 - -
Lal5g1192 424 MobiDBLite consensus disorder prediction 275 298 - -
Lal5g1192 424 SUPERFAMILY E set domains 199 269 IPR014756 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal5g1192 Lal-Chr5 14671319 14679770 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal5g1192 - - gmx:100806282 382.104