Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Lal5g1172 | ATGGCTTCAAACACAAATTCCCTCAACAACTATAACCAAGAAAATTGTTCTTCTTGGACTGTCCTACAGAATAAGCGATTTGAAAAAGCACTTGTTTTTTATAACAAAGATACCAAAGATAGGTGGCAAAACATAGCAAATGTGGTTGGAGATAAATCAGCTGAAGAAATAGAGAGACACTATCAAATTCTTGTGGAAGATATTGAAAAAATAGAATCTGGGCTTATTCCAATTCCTGAGTATAATTCCACAACTATTAGCACTCATGTTGATGAAGAACAAAGGATTTTGAAGTATCTTACGTTGAATTGA | 312 | 0.3333 | MASNTNSLNNYNQENCSSWTVLQNKRFEKALVFYNKDTKDRWQNIANVVGDKSAEEIERHYQILVEDIEKIESGLIPIPEYNSTTISTHVDEEQRILKYLTLN | 103 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Lal5g1172 | 103 | CDD | SANT | 18 | 62 | IPR001005 | - | |
| Lal5g1172 | 103 | Gene3D | - | 11 | 78 | - | - | |
| Lal5g1172 | 103 | PANTHER | MYB FAMILY TRANSCRIPTION FACTOR-RELATED | 1 | 84 | IPR044636 | GO:0003700 | |
| Lal5g1172 | 103 | PANTHER | PROTEIN RADIALIS-LIKE 3 | 1 | 84 | - | - | |
| Lal5g1172 | 103 | SUPERFAMILY | Homeodomain-like | 18 | 72 | IPR009057 | - | |
| Lal5g1172 | 103 | SMART | sant | 15 | 67 | IPR001005 | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Lal5g1172 | Lal-Chr5 | 14437768 | 14438226 | Dispersed/Wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Lal5g1172 | - | - | gmx:100798314 | 122.864 |