Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal5g1165 ATGGAACCCAATCCCCAATCATCAGTTTTGAAGAATTGTGGTCCAGTAACTGAAATGGCGGGTTCAGAGAACATTACAAACAAATCTTCAAGATGGTTACTCAATGGAATGACGGCTCTTGTTACTGGTGGCACCCGTGGAATTGGGCATGCCATAGTGGAAGACTTATGTGGGTTTGGTGCCACAGTTTACACTTGTTCTAGAAATGAAGCAGAGCTGAATAAGTGCTTAGATGAGTGGAGAATTAAGGGTTTTTTGGTTTCTGGGTCAGTGTGTGATGTCTCATCACGACCTCAAAGAGAAAAGCTCATTCAAGAAGCGGCTTCCACCTTCAATGGCAAGCTTAACATTTATGTAAACAATGTAGGAAATAACTTTAGGAAGCCAACCATTGAGTACACTGCTGAAGATTATTCAGAGCTGATGACAGTTAACTTAGACTCTGCATTTCATCTGTGTCAATTAACATATCCTCTTCTAAAAGCATCTGGAATGGGAAGCATTGTGTTCATTTCATCTGTTGCAGGTGTCACCAGCTTGGGTACGGGATCGGTCTATGCCGCAAGTAAAGCTGCAATTAATCAGCTTACAAAAAATCTGGCATGTGAATGGGCAAAAGATAACATAAGGAGCAATTGTGTTGTACCTTGGGCAACCAGAACCCCACTTGTAGAACATTTGTTTCAGAATCAAAAGTTTGTAGATGATATTATGTCTAGAACTCCACTTAAGCGCATTGCAGAACCTGAAGAAGTGTCATCATTGGTAACTTTTCTTTGCTTACCAGCTGCTTCATACATCACTGGACAAGTTATTTGTGTTGATGGAGGCTTAACTGTTTATGGATTTCAACCCAGCATGAGAATTACCTGA 873 0.4089 MEPNPQSSVLKNCGPVTEMAGSENITNKSSRWLLNGMTALVTGGTRGIGHAIVEDLCGFGATVYTCSRNEAELNKCLDEWRIKGFLVSGSVCDVSSRPQREKLIQEAASTFNGKLNIYVNNVGNNFRKPTIEYTAEDYSELMTVNLDSAFHLCQLTYPLLKASGMGSIVFISSVAGVTSLGTGSVYAASKAAINQLTKNLACEWAKDNIRSNCVVPWATRTPLVEHLFQNQKFVDDIMSRTPLKRIAEPEEVSSLVTFLCLPAASYITGQVICVDGGLTVYGFQPSMRIT 290
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal5g1165 290 PRINTS Glucose/ribitol dehydrogenase family signature 38 55 IPR002347 -
Lal5g1165 290 PRINTS Glucose/ribitol dehydrogenase family signature 113 124 IPR002347 -
Lal5g1165 290 PRINTS Glucose/ribitol dehydrogenase family signature 160 176 IPR002347 -
Lal5g1165 290 PRINTS Glucose/ribitol dehydrogenase family signature 186 205 IPR002347 -
Lal5g1165 290 PRINTS Glucose/ribitol dehydrogenase family signature 207 224 IPR002347 -
Lal5g1165 290 PRINTS Glucose/ribitol dehydrogenase family signature 242 262 IPR002347 -
Lal5g1165 290 PANTHER NAD(P)-BINDING ROSSMANN-FOLD PROTEIN 24 287 - -
Lal5g1165 290 Pfam Enoyl-(Acyl carrier protein) reductase 45 279 - -
Lal5g1165 290 ProSitePatterns Short-chain dehydrogenases/reductases family signature. 173 201 IPR020904 GO:0016491
Lal5g1165 290 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 36 281 IPR036291 -
Lal5g1165 290 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 113 124 IPR002347 -
Lal5g1165 290 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 166 174 IPR002347 -
Lal5g1165 290 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 186 205 IPR002347 -
Lal5g1165 290 Gene3D - 18 283 - -
Lal5g1165 290 PANTHER TROPINONE REDUCTASE 24 287 IPR045000 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal5g1165 Lal-Chr5 14366280 14370163 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal5g1165 31 285 Miscellaneous Gene Families AT2G29290 61.479 3.47e-115 330
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal5g1165 K08081 - gmx:100791265 466.848
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal5g1165 5 14366280 14370163 Lal5g1165 5 14366280 14370163 ECH