Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal5g0850 ATGTCATCTTCAGACGAAGAGGATGAGGCTCAGCCACTGTCTGTGTTAAATTACTATTTTGAAGATGACAAAGATGCACCTGTATCATTTTCTGTGTTGCCTGTTCAATGGAATGAGTCTGAGAGTTCGGTTGGCAAGAAAAAGCAATTGTTCCTGCGTGGTGTTGCTGATGATGGGCTGAGGAAAATTTTCATGGAAGTTGTAGCATGGAGATTTGATCTCTCCTATGTGAAGCCGACAATATCGGTGCTACCGAAGAATAAGAAATGGATCAAACTTGAGAAGCCAAGGAAGAGCTATGAGGATACCATAAGGACTATTTTAATCACCATTTACTTCCTGGGTCATGTAAAGAGGAATCCTGACACATCTGCCAAATCTCTGTGGGACAATTTGAGTAGGAATAAAGAGTTCAGCTCTTATGAAGTTATGCCTTCGCACAATGATTTATTAAACCATAAAGCTTTAATGGGTGAAGCTGCCAAAAGGGATGCTGTCTTAGCCAAGTCCAAGCTTTTGCACATGGTTCTGGAAGATAAGTTGGGGTCTAAGAAACTTTCTGATGAGGAAGCTAAAGATTTGGCTCGACCTGGATTTATAATAGACGATATTGAAAATGATATAACTGATGAAATTGCGGAAGAGTCGGATGAAGAGGATGAGTTGTTTGACTCTGTTTGTGCAATTTGTGACAATGGTGGCAATCTTTTATGTTGTGATGGGAAATGCATGAGGTCATTTCATGCTGTTAAGGAGGATGGTGAAGAATCTTCTTGTGAATCTCTTGGTTTTAGTCAGAAGAAAGTTGATGAGATCCAGAACTTTTATTGTGAGAATTGTAAATATAATCAGCACCAGTGTTTTGCATGTGGCAAACTAGGCTGTTCGGATAAATTTTCGGGTGCTGAGGTGTTCAAATGTGCTTCTGCAACATGTGGCCTCTTTTATCATCCACACTGTGTTGCAAAGTTAATACAGGATGTCGCTGAGAATGCTCCAATGGAACTTGAGAGAAATATTGCTCAGGGAGTACCTTTTACTTGTCCTACTCACTATTGCCATGTCTGTAAAGAAATGGAAGACAAGAAGAAACGCGAGTTGCAATTTGCTGTTTGCAGGCGTTGTCCCATGTCTTATCATCGCAAATGTTTGCCAAGAGATATCACTTTGGATGGCATAGATGAAGATATTATAACAAGGGCTTGGGAAGGTCTTCTACCAAACAATCGGATTCTTATATATTGCTTAGACCATGAGATTGATGATGATCTTGAGACGCCGTTAAGAGATCATATAAAATTTCCCGTGTTTAAAGCTAAAGTTGGAGAAATTAATAATGAGAAGACAAAGCCTGCTACCAAAGAGAGAGTTACATTGAAAAAGAACAATGTAGACTTAGATAATTCATTTGGCAGAAGAACTGCTGATATAGTTTCAAAACTGTCTCGAAAAATGTCATCTGAGAAAGGTGTCATGAAGTTTGAAAAGATTTCTGAATCTAACATCCCGAGGAAACCAAAGACAAATGAAGCATCAAAAAGGTGGTCGAATGAAAATAAGATGTCAATCTCAAAAGGAATTGAAAGGCCTGTCTGTGATGATAAATTACCTTCATTGGGTGAGAAATTATATGATGCTTTCTTTCAGAAGGATTCTGAGAAAATAAATTCTGGCAATGATAAGATTGCTAATGCGGCTAATAAAATGACATATTGTGCATCACCTGCGTTAGATGCGGATTCAGAGCAGAGATTGATGGCTCTGTTTAAAGATGCTACGTCAACAATTACTTTGGAGAATGTTGTAAAAGACCATAAGTTTTCTTCTACTCATACTTCCTCGTTGAGAAGTGTTGTGGAGAAGACCATTACAGTAGGGAGGCTGGAAGGGTCAGTTGAGGCTGTTCGAACAGCTCTAAAGATGCTAGAAAATGGGTGCAGCATTCGGGATGCAGAAGCTGTTTGTGGCCCCGATGTTCTTAACCAGATATTTAAGTGGAAGGACAAACTGAGAGTATATCTTGCGCCGGTTCTATATGGTAATCGGTACACCTCGTATGGTCGCCACTTTACACAAGTGGAAAAGCTGGAAGGGATTGTGGATAAACTCCATTGGTATGTTCAGAATGGTGATACTATCGTGGACTTCTGTTGTGGTGCTAATGATTTTAGCATCCTTATGAAGAAAAAGCTGGAAGAGACTGGGAAGAGTTGCTTGTACAGGAATTATGATTTACTTCCAACAAAGAATGATTTTAATTTTGAGATGAGAGATTGGACGACTGTCCAGCCAAAGGAGTTGCCTAGAGGGTCACAATTGATCATGGGCCTCAATCCCCCTTTTGGGCTTAAAGCAGCTTTGGCTAACAAGTTTATAGATAAGGCTCTTGAGTTTAAACCAAAGCTCCTGATTCTGATAGTACCACCAGAGACAGAGAGGCTAGATAAAAAGCAGTCACCTTATGATCTTGTGTGGGAGGATGACAGGTTTCTATCAGGCAAGTCATTCTACCTGCCTGGATCTGTCGACACTAATGACAAACAAATGGAGCAATGGAATGTAAAGCCACCCCCACTCTCCCTTTGGAGCCGTCCTGACTGGATTGATGCACACAAGGCCATAGCCCAGAAGCATGGTCACCTGTTGAGCCAGCGTGAAGCATTAAAAATGGAAAGCTTTAATAATGAAAGGTTACCTGCCAGTCGTGCAATGGATGATGTTGATAATCTCTCACTGGGTAATGATCTCAAGAGTAAAAAAGATCAAGCATCTATGAATGAAGGCCAAAAAAGATGCTCATCTGTTGGAAATGTTGGCCGACAGAGGCAAGAGAGACAGGAATGTAGGATGAGCAAGGCTGAGAGTACCTCACGGAAGAGGAAACAAACCCAGGAAAGCGATGGAAGAGGACCAGGTGTGACCTTACCAGCCAGAAGGCAGGTTGTAAATCAAATGCCTGAGGAAGTACCTGACAGTCCATTCGATCCAATTAATGGGAGATCCTCAGCTGAAGGTTTTCAGCCCAAATCTGTTATTTCACCTTCATATGTTGAGGTTGGTGATCATGGTCATGGGCATTTGGAGCCCATTTATAGCTCAGACATGGAGTATGGAGCAGCCTATGGTGAAACCCATAATTGGCCACGTGTTGCCAATCCCCTTTCTGGTATAAAGGAACACCATGGCAGCCTCCGAGGAGACAGCATTGATAGCCGTGGATATAGGGAGAATGGGGTGCAGTACCTGAGTGAATTAGAGACAAGGCAACGGACTCCTCACTATGGACATCAGGATTATCCTCATCCTATGTCAGCTATGAGGAATAATTATTTATCTGGTCATGATGCTGCTCATGTCCACATGAGACCTAGTTATGGAGGATCTGGTTCAGTGTCCGAGTCTTACATGATGATGAATACACCAGCTATGCAGCGATATGCACCACGGTTGGATGAATTAAACCATGCCGGGATGGATTCTTTGGGGTATGGACCTCCTATAGTTGGTAGAAATGGTACTTTCACAGGCAGTGTACCCCAACCTGGATTTGGAAGTGGGAATTTTGCAGCAGCTCCCAACCATGCATATTCACGCCAGAATTCGGCAGGTTGGTTGGATGAGTAA 3624 0.4192 MSSSDEEDEAQPLSVLNYYFEDDKDAPVSFSVLPVQWNESESSVGKKKQLFLRGVADDGLRKIFMEVVAWRFDLSYVKPTISVLPKNKKWIKLEKPRKSYEDTIRTILITIYFLGHVKRNPDTSAKSLWDNLSRNKEFSSYEVMPSHNDLLNHKALMGEAAKRDAVLAKSKLLHMVLEDKLGSKKLSDEEAKDLARPGFIIDDIENDITDEIAEESDEEDELFDSVCAICDNGGNLLCCDGKCMRSFHAVKEDGEESSCESLGFSQKKVDEIQNFYCENCKYNQHQCFACGKLGCSDKFSGAEVFKCASATCGLFYHPHCVAKLIQDVAENAPMELERNIAQGVPFTCPTHYCHVCKEMEDKKKRELQFAVCRRCPMSYHRKCLPRDITLDGIDEDIITRAWEGLLPNNRILIYCLDHEIDDDLETPLRDHIKFPVFKAKVGEINNEKTKPATKERVTLKKNNVDLDNSFGRRTADIVSKLSRKMSSEKGVMKFEKISESNIPRKPKTNEASKRWSNENKMSISKGIERPVCDDKLPSLGEKLYDAFFQKDSEKINSGNDKIANAANKMTYCASPALDADSEQRLMALFKDATSTITLENVVKDHKFSSTHTSSLRSVVEKTITVGRLEGSVEAVRTALKMLENGCSIRDAEAVCGPDVLNQIFKWKDKLRVYLAPVLYGNRYTSYGRHFTQVEKLEGIVDKLHWYVQNGDTIVDFCCGANDFSILMKKKLEETGKSCLYRNYDLLPTKNDFNFEMRDWTTVQPKELPRGSQLIMGLNPPFGLKAALANKFIDKALEFKPKLLILIVPPETERLDKKQSPYDLVWEDDRFLSGKSFYLPGSVDTNDKQMEQWNVKPPPLSLWSRPDWIDAHKAIAQKHGHLLSQREALKMESFNNERLPASRAMDDVDNLSLGNDLKSKKDQASMNEGQKRCSSVGNVGRQRQERQECRMSKAESTSRKRKQTQESDGRGPGVTLPARRQVVNQMPEEVPDSPFDPINGRSSAEGFQPKSVISPSYVEVGDHGHGHLEPIYSSDMEYGAAYGETHNWPRVANPLSGIKEHHGSLRGDSIDSRGYRENGVQYLSELETRQRTPHYGHQDYPHPMSAMRNNYLSGHDAAHVHMRPSYGGSGSVSESYMMMNTPAMQRYAPRLDELNHAGMDSLGYGPPIVGRNGTFTGSVPQPGFGSGNFAAAPNHAYSRQNSAGWLDE 1207
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal5g0850 1207 MobiDBLite consensus disorder prediction 942 966 - -
Lal5g0850 1207 CDD PHD2_NSD 286 351 - -
Lal5g0850 1207 MobiDBLite consensus disorder prediction 912 926 - -
Lal5g0850 1207 MobiDBLite consensus disorder prediction 927 941 - -
Lal5g0850 1207 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 283 400 IPR013083 -
Lal5g0850 1207 Pfam Cytosine specific DNA methyltransferase replication foci domain 15 134 IPR022702 -
Lal5g0850 1207 PANTHER PHD FINGER-CONTAINING PROTEIN DDB_G0268158 1 1202 - -
Lal5g0850 1207 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 223 282 IPR013083 -
Lal5g0850 1207 Coils Coil 201 221 - -
Lal5g0850 1207 PANTHER ENHANCED DOWNY MILDEW PROTEIN 1 1202 - -
Lal5g0850 1207 SMART PHD_3 226 281 IPR001965 -
Lal5g0850 1207 SMART PHD_3 353 419 IPR001965 -
Lal5g0850 1207 SMART PHD_3 286 352 IPR001965 -
Lal5g0850 1207 MobiDBLite consensus disorder prediction 899 978 - -
Lal5g0850 1207 CDD PHD3_NSD 352 385 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal5g0850 Lal-Chr5 9614514 9632227 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal5g0850 - - gmx:100803073 1582
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal5g0850 5 9614514 9632227 Lal5g0850 5 9614514 9632227 ECH