Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal5g0846 ATGGCTCCTATGGGAGACAATGTGGTAGTGTCCAATATGGAGCTAGAGATGTTGCTTAGCATGAAAGGAGGTAAAGGAGAAGCCAGCTATGCCAACAATTCCCAAGCACAGGTACCTATCCCTTCTTACTATTCAAGGACTACCTCTACTTTGAGTTTGGATCCCTTTCTATTACTGGAGAAGCCAGTATCTTTCAATATGGCCATACATGCCAAGTCCATGCTCCACCTTCTTAAAGAAACCCTAGATGGAGTTCAAATTGATACAAATGACATTCCATTTGTGGTTGTGGACTTGGGGTGTTCATGTGGAAGCAACACCATCAACGTGGTGGATGTGATCATTAAGCACATCATCAAACGTTATGAGGCTTTAGGATTAGACCCACCTGAGTTTTCTGCTTTCTTCTCAGACCTTCCTAGCAATGACTTCAACACCCTCTTCCAGCTCCTTCCTCCAGTAGCCAATTATGGAGTTAGCATGGAAGAATGCCTTGCTGCCAACAACCACCGCTCTTACTTTGCCGCCGGAGTACCTGGCTCTTTCTACCGGAGGCTTTTTCCGGGGAAGTCCATTAACATTTTCCACTCAGCTTTTTCTTTGCATTGGTTATCTCAGGTACCAGAAATTGTTCTAGACAAGAGGACAAGTGCATACAACAAAGGGAGGGTGTTTATCCATGGTGCTAGTGAGATCACAGCAAACGCCTACAAGAAACAATTCCAGACAGACTTGGCAGGCTTCTTGAGAGCAAGGTCAGTGGAGATGAAGAGAGGGGGGTCCATGTTCTTGGTATGTTTAGGCAGAACATCAATGGACCCCACAGACCAATGTGGTGCTGGTCTCCTCTTTGGGACCCACTTTCAAGATGCTTGGGATGATCTTGTCCAAGAGGGACTAATTAGCATTGAGAAAAGAGACAATTTTAACATTCCAGTTTATGCACCAAATCTACAAGACTTCAAGGAGGTGGTTGAATCTGATGGGTCATTTGCCATTAACAAGCTTGAGGTTTTCAAAGGAGGAAGCCCCCTTGTTGTGAACCAGCCAGATGATGCAAGTGAAGTAGGTAAGGCTCTAGCCAATAGCTGCAGGAGTGTGTCCGGGGTCCTTGTTGATGCACATATTGGAGACAAACTTAGCGAGGAGCTGTTTCTTCGGGTGGCGCGGCGAGCCACGGGCCATGGCAAAGAGCTATTAGAGCAACTACAGTTCTTTCATATAGTTGCGTCTCTTACATTTGCTCAATGA 1251 0.458 MAPMGDNVVVSNMELEMLLSMKGGKGEASYANNSQAQVPIPSYYSRTTSTLSLDPFLLLEKPVSFNMAIHAKSMLHLLKETLDGVQIDTNDIPFVVVDLGCSCGSNTINVVDVIIKHIIKRYEALGLDPPEFSAFFSDLPSNDFNTLFQLLPPVANYGVSMEECLAANNHRSYFAAGVPGSFYRRLFPGKSINIFHSAFSLHWLSQVPEIVLDKRTSAYNKGRVFIHGASEITANAYKKQFQTDLAGFLRARSVEMKRGGSMFLVCLGRTSMDPTDQCGAGLLFGTHFQDAWDDLVQEGLISIEKRDNFNIPVYAPNLQDFKEVVESDGSFAINKLEVFKGGSPLVVNQPDDASEVGKALANSCRSVSGVLVDAHIGDKLSEELFLRVARRATGHGKELLEQLQFFHIVASLTFAQ 416
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal5g0846 416 Pfam SAM dependent carboxyl methyltransferase 92 413 IPR005299 GO:0008168
Lal5g0846 416 PANTHER S-ADENOSYL-L-METHIONINE:CARBOXYL METHYLTRANSFERASE FAMILY PROTEIN 11 413 IPR005299 GO:0008168
Lal5g0846 416 Gene3D Vaccinia Virus protein VP39 70 342 IPR029063 -
Lal5g0846 416 Gene3D - 206 395 IPR042086 -
Lal5g0846 416 PANTHER INDOLE-3-ACETATE O-METHYLTRANSFERASE 1 11 413 - -
Lal5g0846 416 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 72 413 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal5g0846 Lal-Chr5 9526396 9534022 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal5g0846 K18848 - gmx:100801476 683.33
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal5g0846 5 9526396 9534022 Lal5g0846 5 9526396 9534022 ECH