Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal5g0303 ATGGTTACAATGATGAAGAATCAACCTTCACAGTGGTGGTGGCTTGATAACAACAACACTGCTAAAAGATCCTCATGGCTTCAATCTACTCTATCAGAGCTAAATGAGAAGACAAAGAGAATGTTAAAATTAATTGAAGAAGATGCAGATTCCTTTGCCCAACGTGCTGAAATGTATTACAAGAAAAGACCAGAACTTTTGATCATGGTTGAAGATTTCTATAGAACACATCGATCATTAGCCGAACGCTATGATCAAATCAAACCCGAACCCGGAATTCGCTTCGTAGCAGAATCCCCTTTTGCTTCTGCTAAGAATCAGATAGAGAAGTTGGTGAGTTTTGCAGATAATGGTTATGATACTTACTCTGAGAATTGTTACACAGAAGAGGATTGTACTGAATCTGAAGTTGATGATCCTGAACAAGTAGAAGAAGAAAACATAAAAGAGAAGCATGTTTCATTTATGGTTGATAATGATGAAGTGATGAAGCTGAATGATGAAATTAAGAGACTCAATGAAGAGAAAAAGAATCATGAGGAACAATTGAAGCAGAAAGATATTATTTGTGATGAAGTGATGAAGTTAAGAGAAGAAATGAAAAGACTTAGAGAAGAAAATAAGACACAAATGGAACAACTTAAGAAGAAAGATGAAGAGAAATTGGAAGTGATAAGACAATTGAGTTTGGCTATAGATATAATGAAACAAGAGAATGTGAAGATGAGAAAGTTCATTGCTAAAGAGGGTACCAAGAAATTGAAGAAGAACCCATTTGAGTTAAGCAAATTTGTTGGAGCATTTTCAGGGAAATTGTTTAATAATGGTACTTCAAAGAATCAACCATGTGTTGAACTTTCTAAACGTGGTTGA 873 0.3471 MVTMMKNQPSQWWWLDNNNTAKRSSWLQSTLSELNEKTKRMLKLIEEDADSFAQRAEMYYKKRPELLIMVEDFYRTHRSLAERYDQIKPEPGIRFVAESPFASAKNQIEKLVSFADNGYDTYSENCYTEEDCTESEVDDPEQVEEENIKEKHVSFMVDNDEVMKLNDEIKRLNEEKKNHEEQLKQKDIICDEVMKLREEMKRLREENKTQMEQLKKKDEEKLEVIRQLSLAIDIMKQENVKMRKFIAKEGTKKLKKNPFELSKFVGAFSGKLFNNGTSKNQPCVELSKRG 290
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal5g0303 290 Pfam KIP1-like protein 12 85 IPR011684 GO:0003779
Lal5g0303 290 Coils Coil 27 47 - -
Lal5g0303 290 PANTHER PROTEIN NETWORKED 4A 10 279 - -
Lal5g0303 290 PANTHER PROTEIN NETWORKED 3A-RELATED 10 279 - -
Lal5g0303 290 Coils Coil 155 220 - -
Lal5g0303 290 ProSiteProfiles Networked (NET) actin-binding (NAB) domain profile. 10 91 IPR011684 GO:0003779
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal5g0303 Lal-Chr5 2689401 2693197 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal5g0303 - - lang:109329363 491.886
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal5g0303 5 2689401 2693197 Lal5g0303 5 2689401 2693197 ECH
Lal5g0303 5 2689401 2693197 Lal13g0209 13 1323885 1325774 PCT
Lal5g0303 5 2689401 2693197 Lal24g0180 24 1315919 1316737 PCT
Lal13g0209 13 1323885 1325774 Lal5g0303 5 2689401 2693197 PCT
Lal24g0180 24 1315919 1316737 Lal5g0303 5 2689401 2693197 PCT