Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal5g0300 ATGAGTAGCCAATACAAGGCTAGTGTAGATGAAATCCACAGTGATGTGAAGGTAGTGGAAAGATCAACAAAAGTTAGACCTTATGAAGTGTTGCTGAGATTGTTGGGACTGTCACTAACTTTGGTTGCAACCATTATTGTTGGTATTGATAAGGAGACAAAGCGAATTTCATATGCTGGAATGCACTTTGAAGTCACTGCTAAGTGGGAATACATGTCTGCTATTGTGTTTTTCTTGGTGTCAAACGCTATAGCATGTTCATATGCAGCAACATCTTTGGTCATATCAGCTATACCAAAAAGCAACATAAACAATAATGTAACACTCTTGGTGATAACATTACTAGACCTTGTGATCATGGCACTTTTATTCTCAGCCAATGGTGCAGCTTCTGCAGTTGGAGAAATAGGACAACATGGTAACTCACATGTTCAATGGATGAAAGTTTGTAATGTTTTTGATGCTTATTGTCGCCACATGACTGTTGCATTAGTCCTCTCTATCATTGGATCCACCATCTTTCTTTTGCTGGTGGCCCTCTCTATTCTCAAACTCCATTACAACAACAACAACAAGTTATGCTAG 585 0.388 MSSQYKASVDEIHSDVKVVERSTKVRPYEVLLRLLGLSLTLVATIIVGIDKETKRISYAGMHFEVTAKWEYMSAIVFFLVSNAIACSYAATSLVISAIPKSNINNNVTLLVITLLDLVIMALLFSANGAASAVGEIGQHGNSHVQWMKVCNVFDAYCRHMTVALVLSIIGSTIFLLLVALSILKLHYNNNNKLC 194
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal5g0300 194 Pfam Casparian strip membrane protein domain 24 171 IPR006702 -
Lal5g0300 194 PANTHER NITRATE, FORMATE, IRON DEHYDROGENASE 11 187 - -
Lal5g0300 194 PANTHER CASP-LIKE PROTEIN 1E1 11 187 - -
Lal5g0300 194 TIGRFAM A_tha_TIGR01569: plant integral membrane protein TIGR01569 31 184 IPR006459 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal5g0300 Lal-Chr5 2649470 2652521 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal5g0300 - - var:108328473 249.98
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal5g0300 5 2649470 2652521 Lal5g0300 5 2649470 2652521 ECH