LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lal5g0282	ATGCTCCACCAAAGTTTGAGATTATTACACTCTTCTTCTTCTTCTTTTCTTTTTCATCATCATCATCACCTTTTACACCAACCCACTAAATTAAAATATCATTTATACAATTACCAATATAACCCTTTCTCAATTCCACCTCTCAAAATCTTCTCAATGGCCACCTCATCTTCATCTAGTTCTCATAACTATACCAATCGACTTGCTTCAGAACAAAGCCCTTATCTTCTACAACATTCACATAACCCAGTTGAATGGTATCCATGGAGTGAAGAAGCTTTCTCCCTAGCACGCAAGCGAGATGTTCCTATATTCTTATCAATTGGGTACAGCACTTGTCACTGGTGTCATGTCATGGAGGTCGAGTCTTTTGAGGACGAAGGGGTTGCCAAGTTGTTGAACGATTGGTTTGTAAGCATTAAGGTGGATAGAGAGGAGCGGCCTGATGTTGATAAGGTATACATGACGTATGTGCAGGCTTTATATGGTGGAGGAGGTTGGCCCCTGAGTGTGTTTCTTTCACCTGACTTGAAGCCTTTAATGGGTGGAACTTACTTTCCCCCTGATGATAAGTATGGAAGACCTGGATTTAAGACTATACTTAGAAAGGTAAAAGAGGCTTGGGATAGTAAGAGGGATATCCTAGTTAAGAGTGGAGCGTCTGCAATTGAACAGCTTTCTGAGGCGTTGTCTGCTAGTTCCGTTTCTGATAAGTTGCCTGATGGAGTTCCAGAGGAAGCATTAGGTCTATGCTCGGAGCAGCTCTCCGGGAGCTATGATTCAAAGTATGGTGGATTTGGATCGGCACCGAAATTTCCCAGACCAGTTGAGATCAACTTGATGCTTTACCACTCCAAAAAGTTGGAGGATACTGGAAAGTTGGGAGAAGCTAATGGAAGTCGGAAAATGGTTTTCTTTAGCTTGCAATGCATGGCAAAAGGGGGCATTCATGATCATATTGGAGGGGGTTTTCACAGATATAGTGTGGATGAGTGCTGGCATGTTCCACATTTTGAGAAGATGCTGTATGATCAAGGGCAGCTTGCGAATGTTTATTTAGATGCCTTTTCTATAACGAAAGATACCTTCTATTCATGTATAGCGCGAGATATCCTTGATTATTTGAGGAGAGACATGATCGGTCCAGAAGGTGAAATTTTTTCGGCAGAGGATGCTGACAGTGCAGAGTTTGAAGGAGCTGCAAGAAAAAAGGAGGGAGCCTTTTACATATGGACCAGCGAGGAGGTTGATGACATACTTGGAGACCATGCTGCTCTTTTTAAGGAGCACTATTACATAAAGCAGTCGGGTAATTGTGACCTGTCTAAAATGAGTGATCCTCATGATGAATTCAAGGGAAAGAGTGTGCTGATTGAGAGAAAGGATGCTTCAGAAATGGCAGCAAAATATGCCATGTCAGCTGAGACATATCAAGAAATTCTCGGAGAAAGTAGGCACAAGCTGTTTGAAGTAAGATCAAGGCGGTCAAGACCACATTTGGATGATAAGGTTATTGTATCTTGGAATGGACTGGCAATCTCATCTTTTGCTAGGGCTTCTAAGATTCTCAAGTGTGAAGCTGAAGGCACCAAATTCAACTTTCCTGTTGTTGGCACTGAACCAAAGGAATACCTGGCAATTGCGGAAAAGGCAGCATTCTTTATTTGGAAGCAACTTTACAATGCGGAGACTCGCAGGCTACACCATAGTTTCAGAAACTCTCCATCCAAAGCTCCTGGTTTCTTGGATGATTATGCTTTTCTGATATCCGGATTGTTGGATCTCTATGAGTTTGGCGGTGGAATCAACTGCCTTTCGTGGGCAATTGATTTACAGGAAACCCAGGATGCTTTGTTTCTTGATAGGGATGGAGGTGGATATTTCAATAATACAGGAGAAGATCGTTCAGTTCTTCTCCGTGTGAAGGAAGACCATGATGGGGCAGAACCCTCTGGGAACTCAGTTTCAGCTATAAATCTTATAAGATTGGCATCCATGGTTTCTGGAAGTAAAGCTGAGCACTATAAGCGAAATGCAGAACATCTTCTGGCGGTTTTCGAGAACAGATTGAAAGATATGGCTATGGCAGTGCCTCTAATGTGTTGTGCCGCAGACATGCTTCGTGTACCTTCTCGAAAGCAAGTGGTTGTCGTCGGTAAAAGGGCTTCCGAGGAATTCGAAAGCATGCTTGCTGCAGCTCATTCATTATATGATCCCAACACAACAGTTATGCATATAGATCCTAACAACAAAGAAGAGGTGGAATTTTGGGAAGTAAATAACAGCAACATTGCTCTCATGGCAAAGAATAACTATGCAGATAACAAGGTTGTTGCTCTTGTATGCCAAAACTTCACTTGTAGCCCTCCTGTGACTGATCATTCTTCACTTGAAGCCTTGATCTCCCACAAACCCACATCTTCTTCTACATAG	2433	0.4254	MLHQSLRLLHSSSSSFLFHHHHHLLHQPTKLKYHLYNYQYNPFSIPPLKIFSMATSSSSSSHNYTNRLASEQSPYLLQHSHNPVEWYPWSEEAFSLARKRDVPIFLSIGYSTCHWCHVMEVESFEDEGVAKLLNDWFVSIKVDREERPDVDKVYMTYVQALYGGGGWPLSVFLSPDLKPLMGGTYFPPDDKYGRPGFKTILRKVKEAWDSKRDILVKSGASAIEQLSEALSASSVSDKLPDGVPEEALGLCSEQLSGSYDSKYGGFGSAPKFPRPVEINLMLYHSKKLEDTGKLGEANGSRKMVFFSLQCMAKGGIHDHIGGGFHRYSVDECWHVPHFEKMLYDQGQLANVYLDAFSITKDTFYSCIARDILDYLRRDMIGPEGEIFSAEDADSAEFEGAARKKEGAFYIWTSEEVDDILGDHAALFKEHYYIKQSGNCDLSKMSDPHDEFKGKSVLIERKDASEMAAKYAMSAETYQEILGESRHKLFEVRSRRSRPHLDDKVIVSWNGLAISSFARASKILKCEAEGTKFNFPVVGTEPKEYLAIAEKAAFFIWKQLYNAETRRLHHSFRNSPSKAPGFLDDYAFLISGLLDLYEFGGGINCLSWAIDLQETQDALFLDRDGGGYFNNTGEDRSVLLRVKEDHDGAEPSGNSVSAINLIRLASMVSGSKAEHYKRNAEHLLAVFENRLKDMAMAVPLMCCAADMLRVPSRKQVVVVGKRASEEFESMLAAAHSLYDPNTTVMHIDPNNKEEVEFWEVNNSNIALMAKNNYADNKVVALVCQNFTCSPPVTDHSSLEALISHKPTSSST	810

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Lal5g0282	810	Pfam	Protein of unknown function, DUF255	65	226	IPR004879	-
	Lal5g0282	810	Gene3D	-	536	714	IPR012341	GO:0005975
	Lal5g0282	810	PANTHER	SPERMATOGENESIS-ASSOCIATED PROTEIN 20	54	803	IPR024705	-
	Lal5g0282	810	Gene3D	Glutaredoxin	63	235	-	-
	Lal5g0282	810	SUPERFAMILY	Six-hairpin glycosidases	254	648	IPR008928	GO:0005975
	Lal5g0282	810	SUPERFAMILY	Thioredoxin-like	64	206	IPR036249	-
	Lal5g0282	810	CDD	SSP411	87	209	IPR004879	-
	Lal5g0282	810	PIRSF	UCP006402_thioredoxin	49	808	IPR024705	-

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Lal5g0282	-		-	gmx:100777751	1371.68

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Lal5g0282	5	2514604	2523298	Lal5g0282	5	2514604	2523298	ECH