Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal5g0269 ATGTTGGAGAAGTGTTTGGGAGCTCAACGATTAAGAAGATTCCAGAGACTTCTCAATCATTCTAAGCTCACCATTCTCTGTCTCCTCTTAACCGTCGTTGTCCTACGTGGCACCATCGGCGCCGGTAAATTCGGCACGCCGGAGCAAGATTTCAACGACATTCGCAACCGCTTTAAATCTCGTAAGTTAATTAAAGACCCTCACCGTGTTCTTGAAGAAAAGATTCTTCCCAAAACGACGTCGTTTTCTGATTCCACCACCAATTACAACGCCTTCGATTTCAACACCTTATTATTGAAAGATAATAACGAAGAAGAAAAAGAAGAACGAGAAAATGAGAAACGCGAGAAATTGAATGAGTCTTATCGTCTCGGCCCTAAAATCTCGGATTGGGATAAACAACGATCAAATTGGCTTCTTTCAAACCCTAATTACCCGAATTTCATTCGACCCGATAAGCCTAGGGTTCTTCTTGTAACTGGGTCGTCACCGAAACCGTGTGAGAATCCCATTGGTGATCACTATCTTTTGAAATCGATTAAGAACAAAATCGATTATTGTCGATTACATGGGATTGATGTGTTTTACAATTTTGCCCTTTTGGATGCTGAAATGGCAGGGTTTTGGGCGAAGCTACCGTTGATTCGGAAGCTTCTATTATCACACCCTGAAGTTGAGTTCTTATGGTGGATGGATAGTGATGCAATGTTTACAGATATGGCTTTTGAAGTGCCTTGGGAGAGGTATAAAGATTATAACTTTGTGTTACACGGGTGGAATGAGATGGTTTATGAAAAGAAGGATTGGATTGGTTTGAACACGGGGAGTTTCTTAATTCGGAATTGTCAATGGTCGTTGGATATTCTTGATGAGTGGGCGCCGATGGGGCCGAAAGGGAAAGTTAGGGATGAAGCTGGGAAAGTACTTACTAGGGGGCTTATGGATAGGCCGGTTTTTGAAGCCGATGATCAATCAGCGATGGTTTATTTATTGGCGAAAAATAAAGATAAGTGGGGTGATAAGGTTTATCTTGAGAGTGGTTATTACTTGCATGGTTTTTGGGGTATTTTGGTTGATAAATACGAGGAAATGATGGAGAAGTACCATCCCGGTCTTGGTGATCATAGGTGGCCTTTGGTGACTCATTTTGTCGGTTGCAAGCCTTGTGCCAAGTTCGGGGATTACCCTGTTGAGAGGTGTTTGAAGCAGATGGATAGGGCTTTCAATTTCGGCGATAACCAAATACTGCAGATTTATGGTTTTACACATAAGTCATTGGGTAGTAGGAGAGTTAAGAGAATACGGAATGAGACTAGGAACCCTCTAGAGGTCAAAGATGAGTTTGGCTTGCTTCATCCATCTTTTAAAGCAGCTCAGGTATCATCGTCCTAG 1392 0.4224 MLEKCLGAQRLRRFQRLLNHSKLTILCLLLTVVVLRGTIGAGKFGTPEQDFNDIRNRFKSRKLIKDPHRVLEEKILPKTTSFSDSTTNYNAFDFNTLLLKDNNEEEKEERENEKREKLNESYRLGPKISDWDKQRSNWLLSNPNYPNFIRPDKPRVLLVTGSSPKPCENPIGDHYLLKSIKNKIDYCRLHGIDVFYNFALLDAEMAGFWAKLPLIRKLLLSHPEVEFLWWMDSDAMFTDMAFEVPWERYKDYNFVLHGWNEMVYEKKDWIGLNTGSFLIRNCQWSLDILDEWAPMGPKGKVRDEAGKVLTRGLMDRPVFEADDQSAMVYLLAKNKDKWGDKVYLESGYYLHGFWGILVDKYEEMMEKYHPGLGDHRWPLVTHFVGCKPCAKFGDYPVERCLKQMDRAFNFGDNQILQIYGFTHKSLGSRRVKRIRNETRNPLEVKDEFGLLHPSFKAAQVSSS 463
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal5g0269 463 Coils Coil 96 121 - -
Lal5g0269 463 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 152 303 IPR029044 -
Lal5g0269 463 PANTHER XYLOGLUCAN 6-XYLOSYLTRANSFERASE 5-RELATED-RELATED 4 462 IPR008630 GO:0016021|GO:0016757
Lal5g0269 463 Pfam galactosyl transferase GMA12/MNN10 family 153 391 IPR008630 GO:0016021|GO:0016757
Lal5g0269 463 PANTHER XYLOGLUCAN 6-XYLOSYLTRANSFERASE-RELATED 4 462 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal5g0269 Lal-Chr5 2359106 2360497 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal5g0269 1 463 Glycosyltransferase AT3G62720 72.961 0.0 732
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal5g0269 K08238 - gmx:100794266 766.918
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal5g0269 5 2359106 2360497 Lal5g0269 5 2359106 2360497 ECH