Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal5g0252 ATGTCTAGTACTAAGTTTGGTCGAGTTCTTAGTATCAGAGACAGAGTTGAAGATACTCTCTCTCTTCATCGTAACCAACTCATTTCTCTCCTCTCTAGATATGTGGCACAGGGTAGAGGGATTTTGCAGCCCCATAGTTTGATCGATGAGCTCGAAAACAATCTTGGTGAGGATCAAGAAACACTGGATCTTAAAACTGGCCCTTTTGCCGAAATCATCAAGTCTGCACAGGAAGCTATAGTTTTGCCTCCCTTTGTGGCAATTGCAGTTCGTCCAAGACCTGGTGTTTGGGAATATGTCCGTGTGAATGTACATGAACTCAGCGTGGAGCAATTGAGCGTTTCTGAATATCTCAGCTTCAAAGAAGAACTTGTAGATGGAAAGATTAATGACCGTTTTGTATTGGAGCTTGATTTTGAGCCATTTAATGCATCATTTCCACGTCCAACCCGCTCATCATCCATTGGCAACGGTGTCCAATTTCTCAACCGCCACCTATCTTCAAATATGTTTCGTAACAAAGATTCATTGGAGCCCTTGCTCGATTTCCTCCGAGTTCACAAATATAAAGGCCAAGCACTGATGTTAAATGATCGTATACAAAGCATTTCCAAGCTCCAGTCTACTTTGGGCAAGGCTGAAGATCATCTTTCTAAGCTTGCACCCGATACACTCTATTCTGAGTTTGAATATGTATTACAAGGAATGGGCTTTGAGAGAGGTTGGGGTGATACTGCCGAACGGGTTTTAGAGATGATGCATCTACTATCCGATATTCTTCAGGCTCCTGATCCTTCTACACTAGAGACTTTTCTTGGGAGAGTGCCTATGGTGTTCAATGTTGTGATATTATCTCCTCATGGCTATTTTGGGCAAGCCAATGTCCTGGGTTTGCCTGACACCGGTGGCCAGGTTGTCTATATACTAGATCAAGTGCGTGCCCTTGAGAATGAGATGCTCCTTCGGATCCAGAAACAAGGACTTAATTTCGCTCCTAGAATTCTAATTGTTACCAGGTTAATACCTGATGCGAATGGGACAACATGCAACCAGCGGCTAGAAAGAGTCAGTGGTACTGACCACACTCATATTTTGCGAGTTCCATTCAGATCAGACAAAGGCGTTCTACGTAAATGGATCTCAAGGTTTGATGTATGGCCTTATCTGGAGGCTTATGCTGAGCTTCGTTTAGACAAAGAGTTCTCTAATACATACTTTATAATTGCCATGCAAGCCTTTCCATTTAATGTTGATGGTTATGCATATCAACAGGATGCTGCCAGTGAAATCATTGCCGAGTTACAAGGTTATCCTGATTTCATCATCGGAAACTACAGTGATGGGAATCTTGTTGCATCTTTATTGGCTTATAAGATGGGAGTTACTCAGTGCACAATCGCACATGCACTGGAGAAGACAAAATATCCAGATTCAGATATATATTGGAAGAAATTCGAGGAAAAATACCATTTTTCATGTCAGTTCACTGCTGATCTAATAGCAATGAATAACGCTGACTTTATCATCACAAGTACATACCAAGAGATTGCAGGAACGAAGAATACTGTTGGTCAGTATGAGAGCCACAGTGCTTTTACTCTTCCCGGACTCTATAGGGTTGTTCATGGCATTGATGTTTTCGATCCCAAGTTCAATATTGTATCTCCTGGAGCAGATATGTCGATATATTTCCCGTACTCGGAAAAGCAGAAAAGACTTACAGCTCTGCATGGTTCAATTGAAAAGCTATTATATGATCCTGAGCAGACTGATGATTACATTGGTTCACTGAAAGACCGATCAAAGCCCATAATTTTCTCCATGGCAAGGCTAGACAGAGTGAAAAACATGACTGGTTTGGTAGAAAGCTATGCTAAGAATAAGAAATTGAGGGAACTGGTTAACCTTGTCGTTGTAGCTGGCTATATTGATGTTAAGAAGTCCAGGGACAGAGAAGAAATTGCAGAAATCGAGAAGATGCATAATCTCATGAAAGAGTATGATTTAAATGGTGATTTCCGGTGGATCGTTTCCCAAACAAATAGAGCACGTAACGGTGAGCTGTATCGCTACATAGCCGACACAAAAGGCGCTTTCGTTCAGCCTGCATTCTATGAAGCTTTTGGACTTACAGTTGTGGAGGCTATGACTTGTGGGCTTCCCACATTTGCTACATGCCATGGTGGTCCTGCCGAGATAATCGAGAACGGTATATCAGGATTCCATATTGATCCTTATCACCCGGACCAAGTTTCTGAGCTATTGGTTGAATTCTTCGACCGATGCAAGGAGGATCCTAGCCATTGGAATAAGATATCTGATGGAGGTCTTCAAAGAATTTATGAAAGGTACACCTGGAAGATCTACTCTGAAAGGCTCATGACTTTGGCTGGGGTTTATAGTTTCTGGAAATACGTATCGAAATTAGAGAGGCGCGAAACTCGACGATACCTTGAGATGTTCTATACACTTAAGTTTCGCGATCTGGCAAATTCTGTTCCACTTGCAAATGATGATCCAAATTAA 2526 0.4192 MSSTKFGRVLSIRDRVEDTLSLHRNQLISLLSRYVAQGRGILQPHSLIDELENNLGEDQETLDLKTGPFAEIIKSAQEAIVLPPFVAIAVRPRPGVWEYVRVNVHELSVEQLSVSEYLSFKEELVDGKINDRFVLELDFEPFNASFPRPTRSSSIGNGVQFLNRHLSSNMFRNKDSLEPLLDFLRVHKYKGQALMLNDRIQSISKLQSTLGKAEDHLSKLAPDTLYSEFEYVLQGMGFERGWGDTAERVLEMMHLLSDILQAPDPSTLETFLGRVPMVFNVVILSPHGYFGQANVLGLPDTGGQVVYILDQVRALENEMLLRIQKQGLNFAPRILIVTRLIPDANGTTCNQRLERVSGTDHTHILRVPFRSDKGVLRKWISRFDVWPYLEAYAELRLDKEFSNTYFIIAMQAFPFNVDGYAYQQDAASEIIAELQGYPDFIIGNYSDGNLVASLLAYKMGVTQCTIAHALEKTKYPDSDIYWKKFEEKYHFSCQFTADLIAMNNADFIITSTYQEIAGTKNTVGQYESHSAFTLPGLYRVVHGIDVFDPKFNIVSPGADMSIYFPYSEKQKRLTALHGSIEKLLYDPEQTDDYIGSLKDRSKPIIFSMARLDRVKNMTGLVESYAKNKKLRELVNLVVVAGYIDVKKSRDREEIAEIEKMHNLMKEYDLNGDFRWIVSQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATCHGGPAEIIENGISGFHIDPYHPDQVSELLVEFFDRCKEDPSHWNKISDGGLQRIYERYTWKIYSERLMTLAGVYSFWKYVSKLERRETRRYLEMFYTLKFRDLANSVPLANDDPN 841
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal5g0252 841 Pfam Sucrose synthase 8 585 IPR000368 GO:0005985|GO:0016157
Lal5g0252 841 PANTHER - 3 394 IPR012820 GO:0005985|GO:0016157
Lal5g0252 841 PANTHER - 420 840 IPR012820 GO:0005985|GO:0016157
Lal5g0252 841 Gene3D Glycogen Phosphorylase B; 282 829 - -
Lal5g0252 841 Pfam Glycosyl transferases group 1 597 769 IPR001296 GO:0016757
Lal5g0252 841 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 297 795 - -
Lal5g0252 841 Gene3D - 25 147 - -
Lal5g0252 841 Gene3D - 148 277 - -
Lal5g0252 841 PANTHER SUCROSE SYNTHASE 420 840 - -
Lal5g0252 841 PANTHER SUCROSE SYNTHASE 3 394 - -
Lal5g0252 841 Gene3D Glycogen Phosphorylase B; 559 786 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal5g0252 Lal-Chr5 2208605 2215754 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal5g0252 1 839 Glycosyltransferase AT4G02280 79.857 0.0 1415
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal5g0252 K00695 - gmx:100793371 1464.51
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal5g0252 5 2208605 2215754 Lal5g0252 5 2208605 2215754 ECH