Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal5g0229 ATGGAAGATTTAGGTGGTACCCGTTTTGACAGTATCAGCAATGCTGTTAGGAGGAAGAGGAGCCAAACTCCACGGAGGCCTGTTTCGCTGCCCGTTTCGCTGCCCGTTTCTGAAGGTCATGACCTGTCTCCCTCGTCGTCAATGCCGTCTTTAGAAGAAGTTGGCAAGGCTTCTAGTGACGAGAATGCTGGTTATGATACTAGTTTCAAGAGAAAAGAATTCAATCATAAGCATGGTGTTTCTCAGGCATCATCTGTTATTGGAGTTGAAGATGATGCCTCCCATGGAAAGCGTAAAAAGGATGGAGGATTTCATGTGTTTTATAACAACGAGCCTGGACGGAGTGGTTTACATGATAGACGCTCTAGTGAAGGCGTTCTTGCTCCAGCAAATTGGAAAGGTTCTAGCAAATCGAGGGATAACTTCAATTCAGAATCAAGAAATGCAGATATGTATGGTGGAAGGAATCCCGAGGATGTGAGTTTGGGGCAATTTGGTGTTTCTCAGGATGGATCCGGGAATGAGAACAAGGTTAAAAAGGTTAAACTGAAGGTTGGCGGTGTGACACGTACCATTCAAGCCAACTCAGCATCTAATAGTGCTTCAGGAAGTGCATCGACTATCAAAAGCTCTCGTGCATCAGATGCCTCTAGGTCACGCCAAAAGCAAAAGAGTAATTCAGATGATAATCATTCTCCTTCTGATAAGAGGCGTAAACTGCAAGGCCTTCCTTGGAAGGATTTTGCAAGGGATGGGTATGGTGTTGGTAAGGAGGAGTCATTGATGGGGAGGACATCTGGAAAGAATACATTTGGTAAGCAAGGAGACAAATCTGAACCAGCTCGTAAGAGCAAGCGAGTACCAAAGAGGCGTGTGCTTGTTGGGGAACTCAGTGATGATGGAAATGAGGATGATGAGATTCGGTACTTGGAAAAGCTGAAAACATCAAAAGTTGCTGTGGTGAATAGAGATGAAGAAGAATTAAGCAAGAAACACCAAAAACTTTCTAGTGTCTTGAGTACGGAAAATGCTGCCTTTTCAGGGTCAAGCAAAAATGGTAAGAAAAGGTCTAGAACTGATCGAGTCGATGAGGATACTGATTATGAGGATGAAGAAGAATCAGTATCTGATGGTGAACTTGAAGATAAGAAAAAGAAAAAACAAAGGAAGGAATCTGTTGAAGTATTGATGGACAGTAAGAGGGAAATGACTCTTACAACGCGTCAACGGGCCCTTCAGTCTGGCAAGGATGCCTCTGGTACAAGTTTAATTGAGTTTCCCAATGGATTACCACCTGCCCCTTCTAGAAAGCAAAAGGAGAAGCTTTCAGAAGTGGAGCAGCAACTGAAGAAAGCTGAGGCTGCCCAGAGGCGTAGAATTCAAGTTGAGAAGGCTGCCAGGGAATCTGAGGCGGAAGCTATCAGAAAAATACTTGGTCAAGACTCCAGTAGGAAGAAGAGAGAAGATAAAATCAAGAAGCGCCAAGAAGAACTGGCACAGGAGAAGGCAGCCAATGCACAAATACTTCCACCAAACACCATCAGATACGTGTATGGTCCTAATGGGACAACTGTGACCTTTCCTGAGGAAATGGGGTTCCCTAGCATATTTAACTCCAAACCCATTAGTTATCCTCCACCTCGGGAGAAATGTGCCGGTCCATCTTGCACCAATCCATATAAATATCGGGATTCAAAATCAAAGCTTCCTCTTTGCAGTCTCCAATGCTACAAAGCTGTCCAGGTGAAGGTAGTGGCTGAAACTACATCTTGA 1773 0.4428 MEDLGGTRFDSISNAVRRKRSQTPRRPVSLPVSLPVSEGHDLSPSSSMPSLEEVGKASSDENAGYDTSFKRKEFNHKHGVSQASSVIGVEDDASHGKRKKDGGFHVFYNNEPGRSGLHDRRSSEGVLAPANWKGSSKSRDNFNSESRNADMYGGRNPEDVSLGQFGVSQDGSGNENKVKKVKLKVGGVTRTIQANSASNSASGSASTIKSSRASDASRSRQKQKSNSDDNHSPSDKRRKLQGLPWKDFARDGYGVGKEESLMGRTSGKNTFGKQGDKSEPARKSKRVPKRRVLVGELSDDGNEDDEIRYLEKLKTSKVAVVNRDEEELSKKHQKLSSVLSTENAAFSGSSKNGKKRSRTDRVDEDTDYEDEEESVSDGELEDKKKKKQRKESVEVLMDSKREMTLTTRQRALQSGKDASGTSLIEFPNGLPPAPSRKQKEKLSEVEQQLKKAEAAQRRRIQVEKAARESEAEAIRKILGQDSSRKKREDKIKKRQEELAQEKAANAQILPPNTIRYVYGPNGTTVTFPEEMGFPSIFNSKPISYPPPREKCAGPSCTNPYKYRDSKSKLPLCSLQCYKAVQVKVVAETTS 590
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal5g0229 590 Coils Coil 484 504 - -
Lal5g0229 590 PANTHER HIT ZINC FINGER AND PAPA-1-LIKE DOMAIN-CONTAINING PROTEIN 1 585 - -
Lal5g0229 590 MobiDBLite consensus disorder prediction 324 438 - -
Lal5g0229 590 Pfam HIT zinc finger 547 578 IPR007529 -
Lal5g0229 590 MobiDBLite consensus disorder prediction 189 214 - -
Lal5g0229 590 MobiDBLite consensus disorder prediction 464 504 - -
Lal5g0229 590 MobiDBLite consensus disorder prediction 91 105 - -
Lal5g0229 590 MobiDBLite consensus disorder prediction 406 421 - -
Lal5g0229 590 PANTHER INO80 COMPLEX SUBUNIT B 1 585 IPR029523 GO:0006338|GO:0031011
Lal5g0229 590 MobiDBLite consensus disorder prediction 39 53 - -
Lal5g0229 590 MobiDBLite consensus disorder prediction 378 405 - -
Lal5g0229 590 MobiDBLite consensus disorder prediction 134 150 - -
Lal5g0229 590 MobiDBLite consensus disorder prediction 334 352 - -
Lal5g0229 590 Pfam PAPA-1-like conserved region 446 531 IPR006880 GO:0031011
Lal5g0229 590 SMART PAPA_1_2 446 531 IPR006880 GO:0031011
Lal5g0229 590 MobiDBLite consensus disorder prediction 1 305 - -
Lal5g0229 590 MobiDBLite consensus disorder prediction 464 500 - -
Lal5g0229 590 MobiDBLite consensus disorder prediction 215 245 - -
Lal5g0229 590 Coils Coil 435 472 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal5g0229 Lal-Chr5 1977928 1983025 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal5g0229 - - gmx:100814323 824.313
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal5g0229 5 1977928 1983025 Lal5g0229 5 1977928 1983025 ECH