Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal5g0224 ATGGAAAATAGACCAGATCCTGATATCGACGACGACGATTTTCTTGACCTTTATAAGGAGTACACTGGCCCTTTGGGATCTGCTCCTACCAATACACAAGAGAAGGCTAAATCAAACAAAAGGTCGAATGCAGGGTCTGACGAGGAGGAGGAGGAGTCCCGTGATCCTAATGCTGTCCCGACTGATTTCACCAGCCGAGAAGCTAAGGTTTGGGAGGCTAAGTCAAAGGCCACTGAGAGGAATTGGAAGAAAAGGAAAGAAGAAGAAATGATCTGCAAACTTTGTGGAGAATCAGGGCATTTCACGCAGGGTTGTCCATCTACTCTTGGAGCAAATCGCAAATCTCAAGATTTCTTTGAACGGATACCAGCAAGAGATAAACAACTAAGAGCACTCTTTACGGAGAAAGTTATAACCAAGATTGAAAGGGATATTGGCTGCAAAATTAAGATGGATGAGAAATTTATTATTGTCAGTGGTAAGGATAGATTAATTTTGGCAAAAGGTGTTGATGCTGTGCACAAGATTAGAGAGGAAGGTGATCAAAGGGGATCTTCTAGTTCTCACATTGCCAGATCAAGGTCACCTGAGAGAAGTCCTGTTAATACTCGGTTCCAATGCTCTGAGCCCCAAAGGTCTCATTCCGGAGGACCACGGAATCCATCTCACTTTCAACAAAGACTTGGTAGGCCAGAGAGAGCTGTTGAAGACCGTGTGCGGGATGACCTTCAAAAGTTTTCAAGAGGTTCTCCACAAGCAAGAGGTAAGTTCTTAGCCTTCAAGCATTATCTCCATCCTGAAGGATTGCCTCCATTACAAACATATTTACTGAAAGGATTGGCTCTCATGGTTTCACTTGCAAATATAAAGATAATTTTTGAATTAAAGCTATCTTATGGAAATAGTGGAGCTAGAGGTCGTTCAAGCCATTCAAGATCTCCAAGACAAACCCCTTATACAGGGAACGCATATAATTCATTTGATGGCCGTGACCAGAGCATGGGTGCGTACAGGAATGGTGGTTGGGATTCTCATAGAAGAGAATCTGGTATCCAACCTGGTCAGCAGTTTGATCATAATGCCTCCTCTCAGACTTTGGAAGAACTAGAATTGGAGTATAAGAAAGAGGCATCAGAGCTAATGAAAATTCGTGACAGGGAAGAAGATGAAGAAAATTTCAAGCATCGTGAGGCTATTAGAGATTTAAGGGAGAATTACATGAACAAAGCTGCTATGCTGAGGGTGACACATGCAAAGCATTGGGAAGAATTTCTTCAGGTTGATTCCCAGAGGCGCGAACTGCAGGCTATGCAACAAATCTCTTCTGGTTATGGGGGTTATAAACATCAGAATTTTCCTGAATATGATGATGGCTCCACTGTCAATACTCACTATTCTGGGACTAATTTACCCTCAGAATCAAGGAACAGATTCCCAGATACTATGGACACTTATCCAAATAGACCTCATGATAATTTTGGTGAATTTCAGAGGCGTGGTGATTTTGCAAAATCTTACAACAGATATTAA 1530 0.4209 MENRPDPDIDDDDFLDLYKEYTGPLGSAPTNTQEKAKSNKRSNAGSDEEEEESRDPNAVPTDFTSREAKVWEAKSKATERNWKKRKEEEMICKLCGESGHFTQGCPSTLGANRKSQDFFERIPARDKQLRALFTEKVITKIERDIGCKIKMDEKFIIVSGKDRLILAKGVDAVHKIREEGDQRGSSSSHIARSRSPERSPVNTRFQCSEPQRSHSGGPRNPSHFQQRLGRPERAVEDRVRDDLQKFSRGSPQARGKFLAFKHYLHPEGLPPLQTYLLKGLALMVSLANIKIIFELKLSYGNSGARGRSSHSRSPRQTPYTGNAYNSFDGRDQSMGAYRNGGWDSHRRESGIQPGQQFDHNASSQTLEELELEYKKEASELMKIRDREEDEENFKHREAIRDLRENYMNKAAMLRVTHAKHWEEFLQVDSQRRELQAMQQISSGYGGYKHQNFPEYDDGSTVNTHYSGTNLPSESRNRFPDTMDTYPNRPHDNFGEFQRRGDFAKSYNRY 509
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal5g0224 509 MobiDBLite consensus disorder prediction 25 39 - -
Lal5g0224 509 SUPERFAMILY Retrovirus zinc finger-like domains 79 111 IPR036875 GO:0003676|GO:0008270
Lal5g0224 509 MobiDBLite consensus disorder prediction 1 15 - -
Lal5g0224 509 MobiDBLite consensus disorder prediction 186 222 - -
Lal5g0224 509 MobiDBLite consensus disorder prediction 177 248 - -
Lal5g0224 509 MobiDBLite consensus disorder prediction 1 70 - -
Lal5g0224 509 MobiDBLite consensus disorder prediction 302 362 - -
Lal5g0224 509 MobiDBLite consensus disorder prediction 229 247 - -
Lal5g0224 509 PANTHER OS01G0252900 PROTEIN 1 509 - -
Lal5g0224 509 PANTHER OS01G0252900 PROTEIN 1 509 - -
Lal5g0224 509 ProSiteProfiles Zinc finger CCHC-type profile. 92 107 IPR001878 GO:0003676|GO:0008270
Lal5g0224 509 Coils Coil 359 386 - -
Lal5g0224 509 MobiDBLite consensus disorder prediction 302 329 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal5g0224 - - gmx:100806099 741.11
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal5g0224 5 1915043 1919421 Lal5g0224 5 1915043 1919421 ECH