Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal5g0210 ATGAGAATTAATGGAAGGTTTTTTTGGCGTTCCGTTTATGAATCACGAAAGCTGTTCCAATCAACCACTAATTTCTCATTCCGTCATCAAATTCCGTTTTCCCTCCGTTCTTATTCTTCCGCCGTAAAATTAAATAAAATGGGAGTAAAAGAATGCACGAAAAGGAAGCCAGAAGTATCACCGTCAGAGTATGCAAAAGCTAACAAGGAGCTCCGGAAGCTCAGTGGTTCTCTAGACCTTATTAATGAGTTGAGGGCCAAACAGAAGGAAATTAATGGTTTGAAGTCGTTGATGGCTGAATGTTCTGAAGATAAAGACATGCTTAATATGGCAACAGAGGAAATTGGCCAGGTCGTAGAGGAAGAAAGAAGATTGCAAAATTTGCTATTGAAGTCATTACTTCCTAAGGATGATGCTGATGAAAGAGATTCTATTTTGGAGGTGAGAGCAGGCACTGGCGGGGAAGAGGCTTCCTTGTTTGCAATGGACATATTTAGAATGTATGAGAAGTATGCTCACCAGAAAGGCTGGAAGTTTGAAGTAGTAGATATAGCTCAATCTGACCATAAAGGATACAAGGAGGCTAGTGCAACCATTGCAGGATCTGGTGTTTTTGGGAAACTTAAATTTGAGAGTGGAATTCATAGAGTACAGCGAGTTCCTGCAACAGAAAAGTTGGGACGCATTCATACCAGTGCTGTTTCTGTTGCAATCCTTCCTCAGGCTGATGTGGTTGATGTTCAATTGAAGAATGACGACTTGAAAATCGATACCTATAGATCTGGTGGTTCAGGTGGTCAGCATGCAAATACAACCAACAGTGCTGTTAGAGTAACTCACATTCCGACAGGGATTGTGGTTGCTATACAAGATGAACGTTCTCAGCATTCGGCTCCATTTGGTTTGAGGGAAGAAAGTAAGAAGAGAGAAATATGTGAGCAAGAGAGTGAAAAGATAGAAAGAGTTGAGCTAGATAGTTGCTTAAGATATTGTAAGGGCCATACTAACATATTTGATGAGCCAGGGTTTGTTAACTGTGATAACAAGGCCAAAGCACTAAAGGTGCTGTGTGCAAAACTATATGAGATGGAAAGGTCCAGACTTCATAGTAATCGATCAAAGCTTCGATCAGAGCAGATTGGTAGTGGAGATAGATCTGAACGCATCCGAACATACAATTTTCCACAAGGCCGTGTAACCGATCATAGAGTTGGCATCACTTATCACTCAATAGATGATGTGATGCAAGGAGAGAGTCTTGATGTCTTCATCGATGCTCTTCTATTGCAAGAAGAAATTGATGCAATTGCAACTTTTAGTTCATCTCAGTAG 1332 0.4077 MRINGRFFWRSVYESRKLFQSTTNFSFRHQIPFSLRSYSSAVKLNKMGVKECTKRKPEVSPSEYAKANKELRKLSGSLDLINELRAKQKEINGLKSLMAECSEDKDMLNMATEEIGQVVEEERRLQNLLLKSLLPKDDADERDSILEVRAGTGGEEASLFAMDIFRMYEKYAHQKGWKFEVVDIAQSDHKGYKEASATIAGSGVFGKLKFESGIHRVQRVPATEKLGRIHTSAVSVAILPQADVVDVQLKNDDLKIDTYRSGGSGGQHANTTNSAVRVTHIPTGIVVAIQDERSQHSAPFGLREESKKREICEQESEKIERVELDSCLRYCKGHTNIFDEPGFVNCDNKAKALKVLCAKLYEMERSRLHSNRSKLRSEQIGSGDRSERIRTYNFPQGRVTDHRVGITYHSIDDVMQGESLDVFIDALLLQEEIDAIATFSSSQ 443
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal5g0210 443 SUPERFAMILY Release factor 61 297 IPR045853 -
Lal5g0210 443 Coils Coil 84 104 - -
Lal5g0210 443 Gene3D - 250 297 - -
Lal5g0210 443 Pfam PCRF domain 59 236 IPR005139 GO:0006415
Lal5g0210 443 Gene3D - 316 440 - -
Lal5g0210 443 Gene3D - 50 138 - -
Lal5g0210 443 Coils Coil 302 322 - -
Lal5g0210 443 Pfam RF-1 domain 245 297 IPR000352 GO:0003747|GO:0006415
Lal5g0210 443 Pfam RF-1 domain 347 403 IPR000352 GO:0003747|GO:0006415
Lal5g0210 443 PANTHER LD18447P 48 441 - -
Lal5g0210 443 SMART PCRF_a_2 96 211 IPR005139 GO:0006415
Lal5g0210 443 Gene3D - 145 249 - -
Lal5g0210 443 SUPERFAMILY Release factor 347 431 IPR045853 -
Lal5g0210 443 PANTHER LD18447P 48 441 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal5g0210 Lal-Chr5 1815678 1822387 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal5g0210 K02835 - gmx:100800412 563.918