Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal5g0195 ATGGTAATGTATGTTGTTTTTTCACAACGCTTTCCCTCTCCATTAATGGAGAGGAGTCTTCCTCATAGTGAACTTGGTGCATTCAAAGAATTCAGTATGGCCTTTCAATCACCAATACTTGCAGGACCTAAAGCTAACTCGAAGAATGTCGCATCGATCATATTAGGCGGTGGAGCCGGAACTCGGCTATTTCCTCTTACTCAAAGAAGGGCTAAACCTGCTGTAAGCAATTATAAACATATTTCTTTCAGGCTTAGACTAAAATTGTTGTTACTGTTCCAATTGGAGGATGCTATAGGCTTGTCCTTAAACAATCACATTGCTAGAACTTATGATTTAGGAAGTGGCATTAACTTTAAGGGTGGTTTTGTTGAGGTATTGGCAGCTACTCAAACAGCTGGTGAATCAGGAAATAAGTGGTTTGAGGGTACTGCTGATGCTGTAAGACAATTTCTCTGGTTGTTTGAGGATGCTGAGCATAAAAACATAGAGAATGTCCTAATATTGTGTGGTGATCAACTCTATAGAATGGATTATATGGATCTTGTGCAGAAACACATTGATTCATGTGCAGATATATCTGTATCTTGTCTTCCAGTTAATGGCAGATGTAGTCATGCATCAGATTTTGGATTAGTGAAGGTAGATGAAAGAGGAAGGATAAGGCAGTTCCTAGAAAAACCCAATGGAGAATTGTTAAGATCTATGATACAAGTCTTTTTGGATTATCAGCTCAAAAAGCAAAGGAATTTCCATATATTGCATCAATGGGTATATATGGTCCTATATCCTAATGCAAATGATTTTGGATCTGAGGTTATTCCAATGGCTGCAAAAGATTTTAATGTTCAGGCATGCTTTTTTAGTGGCTACTGGGAAGATATTGGGACTATAAAATCTTTCTTTGATGCAAACTTGGCTCTTTTTGATCAGCCAGAGAAATTTGAGTTGTATGATCAATCAAAGCCTATTTTTACATGTCCAAGATTCCTACCACCAACTAAAATGGAGAATTGCAAGGTAATTAATTCTTTGATTTCAAATGGTTCATTTTTAAGAAAGTGTAACATTGAACATTCCATTGTGGGAATTCGTTCAAGACTTGATTCTGGTGTTCACTTAAAGAGTCAATTATAA 1137 0.3668 MVMYVVFSQRFPSPLMERSLPHSELGAFKEFSMAFQSPILAGPKANSKNVASIILGGGAGTRLFPLTQRRAKPAVSNYKHISFRLRLKLLLLFQLEDAIGLSLNNHIARTYDLGSGINFKGGFVEVLAATQTAGESGNKWFEGTADAVRQFLWLFEDAEHKNIENVLILCGDQLYRMDYMDLVQKHIDSCADISVSCLPVNGRCSHASDFGLVKVDERGRIRQFLEKPNGELLRSMIQVFLDYQLKKQRNFHILHQWVYMVLYPNANDFGSEVIPMAAKDFNVQACFFSGYWEDIGTIKSFFDANLALFDQPEKFELYDQSKPIFTCPRFLPPTKMENCKVINSLISNGSFLRKCNIEHSIVGIRSRLDSGVHLKSQL 378
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal5g0195 378 ProSitePatterns ADP-glucose pyrophosphorylase signature 1. 56 75 IPR005836 GO:0005978|GO:0008878
Lal5g0195 378 Gene3D Hexapeptide repeat proteins 330 378 - -
Lal5g0195 378 ProSitePatterns ADP-glucose pyrophosphorylase signature 2. 140 148 IPR005836 GO:0005978|GO:0008878
Lal5g0195 378 PANTHER GLUCOSE-1-PHOSPHATE ADENYLYLTRANSFERASE LARGE SUBUNIT 4, CHLOROPLASTIC/AMYLOPLASTIC 31 377 - -
Lal5g0195 378 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 39 329 IPR029044 -
Lal5g0195 378 Pfam Nucleotidyl transferase 52 308 IPR005835 GO:0009058|GO:0016779
Lal5g0195 378 PANTHER GLUCOSE-1-PHOSPHATE ADENYLYLTRANSFERASE-RELATED 31 377 IPR011831 GO:0005978|GO:0008878
Lal5g0195 378 SUPERFAMILY Nucleotide-diphospho-sugar transferases 48 349 IPR029044 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal5g0195 Lal-Chr5 1696810 1701943 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal5g0195 K00975 - gmx:100805739 485.337
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal5g0195 5 1696810 1701943 Lal5g0195 5 1696810 1701943 ECH