Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal5g0190 ATGAAGCTCTTAGGTTCATTGCTAATGGTGATTCTTGCTTTGGTGTTAACCATTACCACTGCTTCAGATCCTGATCCTCTTCAAGATTTCTGTGTTGCAGACCTTACATCTGTGGTGAAAGTGAATGGATTCACATGCAAAGCTTCCTCAAACGTAAATGCAACTGATTTTTCATCAAATATACTAGCCAAACCAGGTGCAACCAACAACACCTATGGGTCCCTAGTGACTGGAGCCAATGTTGAAAAAGTGCCAGGACTCAACACTTTAGGTGTCTCTTTATCACGCATTGATTATGCACCAGGTGGTTTAAACCCACCACACACTCATCCACGTGCTACTGAAGTTGTTTTTGTTCTAGAAGGAACATTAAATGTTGGGTTCATAACAACATCAAATGTACTTATATCAAAGAACATTACCAAAGGTGAAATTTTTGTGTTCCCAAAAGGTTTAGTTCATTTTCAAAAGAACAATGGTAACAAACCAGCTTCAGTTATTGCTGCATTTAATAGCCAATTACCTGGAACACAATCCATTGCTCTTACTTTGTTTACTGCAACACCAACAGTTCCAGATAATGTTTTGAGCAAAGCTTTTCAAATTGGTACTAATGAGGTTGAGATAATCAAGTCTAATCTTGCTCCCAAGAAGTAG 657 0.3836 MKLLGSLLMVILALVLTITTASDPDPLQDFCVADLTSVVKVNGFTCKASSNVNATDFSSNILAKPGATNNTYGSLVTGANVEKVPGLNTLGVSLSRIDYAPGGLNPPHTHPRATEVVFVLEGTLNVGFITTSNVLISKNITKGEIFVFPKGLVHFQKNNGNKPASVIAAFNSQLPGTQSIALTLFTATPTVPDNVLSKAFQIGTNEVEIIKSNLAPKK 218
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal5g0190 218 SUPERFAMILY RmlC-like cupins 23 214 IPR011051 -
Lal5g0190 218 SMART Cupin_1_3 59 208 IPR006045 -
Lal5g0190 218 Pfam Cupin 62 207 IPR006045 -
Lal5g0190 218 PANTHER GERMIN-LIKE PROTEIN SUBFAMILY 3 MEMBER 3 13 216 - -
Lal5g0190 218 PRINTS Germin signature 108 128 IPR001929 GO:0030145
Lal5g0190 218 PRINTS Germin signature 138 158 IPR001929 GO:0030145
Lal5g0190 218 PRINTS Germin signature 171 186 IPR001929 GO:0030145
Lal5g0190 218 Gene3D Jelly Rolls 22 216 IPR014710 -
Lal5g0190 218 CDD cupin_OxOx 23 214 - -
Lal5g0190 218 ProSitePatterns Germin family signature. 103 116 IPR019780 GO:0030145
Lal5g0190 218 PANTHER GERMIN-LIKE PROTEIN 13 216 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal5g0190 Lal-Chr5 1649823 1652972 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal5g0190 8 218 Miscellaneous Gene Families AT3G05930 55.660 3.52e-81 239
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal5g0190 - - gmx:100302722 362.459