Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal5g0184 ATGAGTTCTTCACATTCACCATCAGAAGGAAGATCCACCGTCACTTCACAAGATCTATGGTCAGAAATAATCGCTGATCAAACTCAACAACGCTACCATCAACAACAAATCGATGTCGTTTATCAAAGACGAAAACCTCGCAATAACCAAAACGACGCTAACTCGAAGCAAGTTGATTCAAATCTAATGCGACCTATTCGGGTTAGTTTAGTAGATCCGAATAAACGAGTGAGTTGGAATCGTTCTCTTTCCACCAGAGGGAGGACAAGTATAGCTGTTGGTGCTTGTATGGTTTACCAGCCTCAGTCAAAAAATGACAAAAGAAAAGGGAAACCTGCCCTTCCAAAAGGAAAGTTTGTGAAACCTCCTAATTTTGACAATGAGAGATTATACTTCCAAGAGGTTGATGCTTTTGACTTGATGGAAGAGAGCCCTTCGCCGAAGAAAGCTGGCATGTGGCTTGTTGGCAATTCAAAAGAAGAGGCTGAAGTACCACCTGTATGCTCTAGATTAGAAAAATGGTTATATTCCAGACAATTAAACCCCGGCTACAGTTCCTCTACCACACTATTTAAGATACTAGAGACTCCATCAACAATTTCCGGAACTAGTCATGATTTCAATTTCTGTGCTTCAGACTTGAGAACATTGGAAAGAACTGGAGTAAACAATTCACAATCGGATAAAATCAAAACTGGAGACAATAGAGGTTTTATTGTTGGAAGTTCTTCTGGGATTGACATAAATTTGCGAATAAAGGAAGAGATACAGTCTGATCAATATGATGAAGGCCATGAACATATAGAAGCAGCTGTTAAAAAACTCTCTTTGACATCAACTTCATCTTTGGTAGATGATGATCATATCAGTCCATTTTCTGCCTTGTTAGCGATTTGTGGACAGTTTGCGCCTTTGATGTTACAAGATGCATTCTCTAGTGATTCAGAAACTGTTGTCAAAATTGGTGAAGGAACATTTGGAGAAGCATTCAAGGTAGGCAAATATGTCTGCAAAATAGTTCCGTTTGATGGGGACTTAAGAGTGAATGGGGAAGTCCAAAAGAGATCTGAAGAATTGATGGAGGAGGTGCTTCTTTGCAAAACTCTTAATCAATTGAGAGGAAATGTTGGAGACTCTAACAATGTATGCAGAACATTCATAGAATCGATAGAATTTAGAGTATGCCAAGGTCCTTACAGCGGTGCACTACTTGGAGCATGGGAAGATTGGGATGATAAGCATGGTTCAGAAAATGATCACCCAAAAGAGTTCCCAGAGAAACAGTGTTACGTGGTCTTTGTACAAGAACATGGTGGCAAGGATCTTGAAAGTTTTGTACTCCTGAATTTTGACGAGGCAAGGACTTTACTGGTTCAGGTTACAGCTGGGCTTGCTGTTGCTGAGTCTGCCTATGAATTTGAACACCGTGATCTTCACTGGGGAAATATACTCATCAGTCGAAGTGATTCCGTAAAATTGCAGTTCACTCTTGATGGCAAGGATATTTTTGTTAAAACATATGGATTGTTAGTATCTATTATTGACTTTACCCTGTCAAGAATTAATACAGGTGATAGAATACTTTACTTAGATCTTTCCTCAGATCCGGACCTCTTTAAAGGACCAAAAGGGGACAAACAGTCAGAAACATATCGGAGGATGAAGGATGTAACAGAAGATTGGTGGGAAGGAAGTTTTCCTAAAACAAATGTCTTGTGGTTGCATTACTTGGTAGACATACTTCTCTTGAAGAAATCATTTGAACGTACTTCAAAGAATGAGAGAGATTTACGCTCGTTGAAGAAGCGTCTCGACAAGTATAATTCAGCTAAGGAAGCAATCAATGATCCTTTCTTCAATGACTTGATTGTTGAGAATGACAACTGA 1887 0.3932 MSSSHSPSEGRSTVTSQDLWSEIIADQTQQRYHQQQIDVVYQRRKPRNNQNDANSKQVDSNLMRPIRVSLVDPNKRVSWNRSLSTRGRTSIAVGACMVYQPQSKNDKRKGKPALPKGKFVKPPNFDNERLYFQEVDAFDLMEESPSPKKAGMWLVGNSKEEAEVPPVCSRLEKWLYSRQLNPGYSSSTTLFKILETPSTISGTSHDFNFCASDLRTLERTGVNNSQSDKIKTGDNRGFIVGSSSGIDINLRIKEEIQSDQYDEGHEHIEAAVKKLSLTSTSSLVDDDHISPFSALLAICGQFAPLMLQDAFSSDSETVVKIGEGTFGEAFKVGKYVCKIVPFDGDLRVNGEVQKRSEELMEEVLLCKTLNQLRGNVGDSNNVCRTFIESIEFRVCQGPYSGALLGAWEDWDDKHGSENDHPKEFPEKQCYVVFVQEHGGKDLESFVLLNFDEARTLLVQVTAGLAVAESAYEFEHRDLHWGNILISRSDSVKLQFTLDGKDIFVKTYGLLVSIIDFTLSRINTGDRILYLDLSSDPDLFKGPKGDKQSETYRRMKDVTEDWWEGSFPKTNVLWLHYLVDILLLKKSFERTSKNERDLRSLKKRLDKYNSAKEAINDPFFNDLIVENDN 628
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal5g0184 628 Pfam Haspin like kinase domain 271 615 - -
Lal5g0184 628 CDD PKc 321 551 - -
Lal5g0184 628 Gene3D Phosphorylase Kinase; domain 1 305 437 - -
Lal5g0184 628 PANTHER SERINE/THREONINE-PROTEIN KINASE HASPIN 77 626 - -
Lal5g0184 628 PANTHER INTERLEUKIN-1 RECEPTOR-ASSOCIATED KINASE 77 626 - -
Lal5g0184 628 SUPERFAMILY Protein kinase-like (PK-like) 320 622 IPR011009 -
Lal5g0184 628 ProSiteProfiles Protein kinase domain profile. 315 628 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal5g0184 628 SMART serkin_6 315 619 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal5g0184 628 SMART DUF3635_2 536 619 IPR024604 -
Lal5g0184 628 Gene3D Transferase(Phosphotransferase) domain 1 438 619 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal5g0184 K16315 - gmx:100790036 883.248
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal5g0184 5 1601040 1608927 Lal5g0184 5 1601040 1608927 ECH