Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal5g0182 ATGGCTAGGAAGAAGATCAGAGAATTCCACTCCAAGAAACTCATCAAAGAACATCTCAAACGCATTGCTTCAATTCATCTTGATATTCTATCAGTTCAGGTGACAGAATCAACTGATTTTACTGAGTTGACAAAACAATATCCTTGGATTTCTACGACCAAGTTGGTTGTGAAGCCTGATATGTTGTTTGGGAAACGTGGAAAGAGTGGTTTAGTTGCTCTTAATTTAGATATAGCCCAAGTGGCTAAATTTGTTAATACTCGCCTTGGTGTTCAGGTTGAGATAGGTGGTTGCAAGGCACCTATAACTACATTCATTGTTGAACCATTTGTGCCTCATGATGATGAGTATTACCTCTCTATTGTTTCCGAAAGGTTGGGGTGTACCATAAACTTTTCTGAATGTGGAGGCATAGAAATTGAAGAGAATTGGGATAAGGTTAAAACTATATTCCTTCCAACAGAGAAAACTATGACTCTAGAAGCATGTGCACCATTGATTGCTACACTTCCTTTGGAGGTGAGTATTTTTTTTGGATTAGTATGGTCTGGAAGCGAGGAAAGTGCTTATTCTACCTTCGATTCTCAGATTCGAGGAAAAATTGGCGATTTCATAATTGGTGTGTTTGCTGTCTTTCAAGATCTGGACTTCAGTTTTCTCGAGATGAATCCGTTTACACTGGTGAATGAGAAGCCATATCCGTTGGATATGAGAGGGGAACTAGACGACACTGCCGCATTCAAGAACTTCAACAAGTATAGTCCTTTTGATATTGATCTTCAGAATAGTTTAATTTTGAAGTGGGGTAACATAGAGTTTCCGTTGCCTTTCGGAAGAGTTCTGAGCCCTGCAGAAAGCTTCATTCATTCCTTCGACGAGAAGACAAGTGCATCCCTGAAATTTACGGTATTAAACCCAAAAGGACGCATCTGGACAATGGTAGCTGGAGGTGGTGCAAGCGTTATTTATGCCGATACTGTTGGAGATTTAGGCTATGCATCAGAGCTTGGAAACTATGCTGAGTACAGTGGAGCTCCAAATGAGGAGGAGGTGTTGCAGTACGCAAGAGTCGTAATCGATTGTGCTACAGCAGACCCCGATGGCCGTAAGAGAGCCCTTCTTATTGGAGGTGGCATTGCAAACTTCACCGACGTTGCTGCCACATTCAGTGGTATTATTCGAGCGCTGAAAGAGAAGGAATCGAAACTTAAAGCAGCAAGAATGAACATCTATGTTAGAAGAGGTGGTCCAAACTATCAGACTGGTTTGGCAAAAATGTCTGCATTGGGCGAAGAATTGGGACTACCAATTCAGGTTTATGGACCAGAAGCCACAATGACAAGCATATGCAAACAAGCTATTGATTGCATCATTTCTGAAGCATGA 1386 0.4149 MARKKIREFHSKKLIKEHLKRIASIHLDILSVQVTESTDFTELTKQYPWISTTKLVVKPDMLFGKRGKSGLVALNLDIAQVAKFVNTRLGVQVEIGGCKAPITTFIVEPFVPHDDEYYLSIVSERLGCTINFSECGGIEIEENWDKVKTIFLPTEKTMTLEACAPLIATLPLEVSIFFGLVWSGSEESAYSTFDSQIRGKIGDFIIGVFAVFQDLDFSFLEMNPFTLVNEKPYPLDMRGELDDTAAFKNFNKYSPFDIDLQNSLILKWGNIEFPLPFGRVLSPAESFIHSFDEKTSASLKFTVLNPKGRIWTMVAGGGASVIYADTVGDLGYASELGNYAEYSGAPNEEEVLQYARVVIDCATADPDGRKRALLIGGGIANFTDVAATFSGIIRALKEKESKLKAARMNIYVRRGGPNYQTGLAKMSALGEELGLPIQVYGPEATMTSICKQAIDCIISEA 461
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal5g0182 461 Gene3D - 1 255 - -
Lal5g0182 461 Gene3D - 278 460 IPR016102 -
Lal5g0182 461 SUPERFAMILY Glutathione synthetase ATP-binding domain-like 4 257 - -
Lal5g0182 461 Pfam ATP citrate lyase citrate-binding 279 455 IPR032263 -
Lal5g0182 461 SUPERFAMILY Succinyl-CoA synthetase domains 295 442 IPR016102 -
Lal5g0182 461 Pfam ATP-grasp domain 6 142 IPR013650 -
Lal5g0182 461 PANTHER ATP-CITRATE SYNTHASE 1 176 - -
Lal5g0182 461 PANTHER ATP-CITRATE SYNTHASE 192 461 - -
Lal5g0182 461 PANTHER ATP-CITRATE SYNTHASE ALPHA CHAIN PROTEIN 3 1 176 - -
Lal5g0182 461 PANTHER ATP-CITRATE SYNTHASE ALPHA CHAIN PROTEIN 3 192 461 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal5g0182 Lal-Chr5 1576826 1582036 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal5g0182 1 458 Acyl Lipid Metabolism Gene Families AT1G09430 78.384 0.0 737
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal5g0182 K01648 - gmx:100787551 747.658
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal5g0182 5 1576826 1582036 Lal5g0182 5 1576826 1582036 ECH