Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal5g0178 ATGGATTTCAACAATCCTGTTGGAGAAAATTATGCCAATCCAAGGACTTGCTTCTTTCATGTTCTCTTCAAGGCTGCAGCATTGGCATTTTACATTCTCTTTGCCCTCTTCATTGATAACTTTGTCATCATTTTTGTGGTGACTGTTCTTCTTGCTGCACTTGACTTTTGGGTAGTCAAGAATGTGAGTGGGAGAATTTTAGTTGGTTTGAGGTGGTGGAATGAAATAAATGATGAGGGTGAGAGCATTTGGAAATTCGAATGTCTTGACCAAGAGTCACTGGCTCGGATGAACAAGAAAGATTCATGGCTTTTCTGGTGGACTCTTTACCTTACGGCAGCTGCGTGGATTATTCTGGCAATATTCTCTCTCATAAGGCTTCAAGCTGATTACCTCCTTGTTGTAGGAGTTTGTTTGACCCTCAGTATTGCAAATATCATTGGTTTTACCAAATGCCAAAAAGATGCTAAGAAGCAGATTCAACAATACGCGTCGCAAACAATCGCATCTCGGTTCTCGTCTACCTTACAATCAGCATTCACTATAGTCTGA 552 0.4076 MDFNNPVGENYANPRTCFFHVLFKAAALAFYILFALFIDNFVIIFVVTVLLAALDFWVVKNVSGRILVGLRWWNEINDEGESIWKFECLDQESLARMNKKDSWLFWWTLYLTAAAWIILAIFSLIRLQADYLLVVGVCLTLSIANIIGFTKCQKDAKKQIQQYASQTIASRFSSTLQSAFTIV 183
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal5g0178 183 Pfam Eukaryotic protein of unknown function (DUF846) 13 152 IPR008564 GO:0016021
Lal5g0178 183 PANTHER UNCHARACTERIZED 1 183 IPR008564 GO:0016021
Lal5g0178 183 PANTHER GOLGI APPARATUS MEMBRANE PROTEIN TVP23 1 183 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal5g0178 Lal-Chr5 1544182 1547346 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal5g0178 - - gmx:100527655 342.813
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal5g0178 5 1544182 1547346 Lal5g0178 5 1544182 1547346 ECH
Lal3g1429 3 20220587 20223649 Lal5g0178 5 1544182 1547346 LSH