Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal4g1664 ATGTCGATGATGCTGAAGAGGCTATCAAATTCCAAGTTACTGAGACTCATTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCACTTCCGTGCTTCTTCCTTCCATCCCGGGGGCTCAGAGTCTCTGGTTCTGATGTTAGAGTGGGAAACATAATTGAGAAACAGGGGCGCATTTACGAGGTTCTTAAAGTAGATCACTCTCATGAAGGAAGAGGAAAAGCCACTGTCAAGGTGGAACTTCGTGATATTGCCCACGGAAACAAGGCAATACAACGAATTGCTACTGATGAGGATATTGAAAGGGTCTATGTTCAAGAAAAGAGTTTTATGTATATGTGCACTGACCAGGATGGAACCGTAGTATTAATGGACTCTGATACATTTGATCAAATTGAAGTTTCCGCAGACTTGTTTGGCAAGAATTCTTCATATCTACAAGATGGAATGAAAGTTAAGGTGCAATTTTATGATGACAAGCCTTTTTCTGCTTCTGTTCCAAAACGTGTTACATGTATTGTCAAAAAAGAGATTGCAGCCACTCCAAGGAATAAAAAGGTTGTACTGGAGAATGGTGGCCTTATGGTTGAAGTTCCTCCTCACATTGTAGCTGGTGATGCCATAGTTGTTAGTACAGAGGATGACTCTTACATGGAAAGGGCTAAAGCATAG 669 0.4081 MSMMLKRLSNSKLLRLISSSSSSSSSSSLPCFFLPSRGLRVSGSDVRVGNIIEKQGRIYEVLKVDHSHEGRGKATVKVELRDIAHGNKAIQRIATDEDIERVYVQEKSFMYMCTDQDGTVVLMDSDTFDQIEVSADLFGKNSSYLQDGMKVKVQFYDDKPFSASVPKRVTCIVKKEIAATPRNKKVVLENGGLMVEVPPHIVAGDAIVVSTEDDSYMERAKA 222
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal4g1664 222 Gene3D - 103 166 IPR012340 -
Lal4g1664 222 Pfam Elongation factor P (EF-P) OB domain 111 160 IPR001059 GO:0003746|GO:0006414
Lal4g1664 222 PIRSF EF-P 39 221 IPR020599 -
Lal4g1664 222 CDD S1_EF-P_repeat_1 106 166 IPR001059 GO:0003746|GO:0006414
Lal4g1664 222 ProSitePatterns Elongation factor P signature. 185 204 IPR013852 -
Lal4g1664 222 SMART EFP_2 106 161 IPR001059 GO:0003746|GO:0006414
Lal4g1664 222 Gene3D - 170 222 IPR012340 -
Lal4g1664 222 SUPERFAMILY Nucleic acid-binding proteins 107 169 IPR012340 -
Lal4g1664 222 SMART Elong_fact_P_C_2 169 219 IPR015365 GO:0005737|GO:0043043
Lal4g1664 222 SUPERFAMILY Translation proteins SH3-like domain 42 102 IPR008991 -
Lal4g1664 222 SUPERFAMILY Nucleic acid-binding proteins 179 220 IPR012340 -
Lal4g1664 222 PANTHER ELONGATION FACTOR P 22 220 IPR020599 -
Lal4g1664 222 Pfam Elongation factor P (EF-P) KOW-like domain 43 97 IPR013185 -
Lal4g1664 222 Pfam Elongation factor P, C-terminal 177 219 IPR015365 GO:0005737|GO:0043043
Lal4g1664 222 Gene3D - 41 101 IPR014722 -
Lal4g1664 222 PANTHER ELONGATION FACTOR P (EF-P) FAMILY PROTEIN 22 220 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal4g1664 Lal-Chr4 20681613 20691173 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal4g1664 - - cam:101506432 300.827