Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal4g1646 ATGTGTTTCTCTAATTTGGTCAATCAGGATATATCAATTCGTTCAGGAAGCAATCATTGTTTAACTGCTGAGGCACAGGATAAAGATGACAGCCTCATTCTACCTGGGTTGTCGGATGATGTGGCAAAGCATTGCCTTGCACTCATGCCTCACAAATACTTCCCAAGAATGGCTCATGTCAGCAAGAAATGGAGAATGTTTATTCAAAGCAAAGAATTTATTACTGTGCGGAAACTGGCAGGGATGCTCGAGGAATGGATCTATTTCTTAATAATGGATAATGAAGGAAATGAAAGCCACTGGGAGGTTATGGACCGCCTTGGTCATGAAAGCCGACCTCTTCCACCAATGCCTGGTCCAGGAAAGACTAGGTTCGGAGTGGTGGTTATTAATGGAAAGTTTCTTGTTATCGCTGGTTATTCAGCTATTAATGGATCTGCCTTTGCCTCAGAAGAGGTTTACCAATATGATTCTTATCTCAACAGTTGGAGCAAATTATCAAACATGAATGTGGCTCGTTATGACTTTGCTTGCGCCGAAGTGAATGGCTTGGTTTATGCTGTGGGAGGCTATGGGGCGAACGGTGACAATCTCTCCAGTGTTGAGGTGTACGACCCGGATACTAACAAATGGACACTGATAGAGAGCCTTCGTCGGCCAAGATGGGGTTGCTTTGCATGTGGATTCGAAGGTAAGCTCTATGTGATGGGTGGAAGGTCAAGCTTCACCATTGGAAATTCCAAGTTTGTTGATGTATATAACACTGAGAAGCACAGCTGGTGTGAGATGAAGAATGGTTGTGTTATGGTCACAGCTCATGCAGTGTTGGAAAATAAGTTGTTCTGTATGGAGTGGAAGAACCAAAGGAAGTTAGCAATATTCAGTCCAGAGGACAGTTCATGGGGAATGGTAGCTGTCCCATTGACAGGCAGCTCATGTGCCGGTTTTCGATTTGGCATACTTGATGGAAAGCTGTTGCTATTCCCACTTGAGGCAAAAAATACTTTTCAAACATTGTTATATGATCCAAATGCAGATATAGGGTCAGAGTGGCAGATTTCTGACATAAAACCATCTGGTTTATGCTTATGCAGTGTAACAATCAAGGCATGA 1113 0.4313 MCFSNLVNQDISIRSGSNHCLTAEAQDKDDSLILPGLSDDVAKHCLALMPHKYFPRMAHVSKKWRMFIQSKEFITVRKLAGMLEEWIYFLIMDNEGNESHWEVMDRLGHESRPLPPMPGPGKTRFGVVVINGKFLVIAGYSAINGSAFASEEVYQYDSYLNSWSKLSNMNVARYDFACAEVNGLVYAVGGYGANGDNLSSVEVYDPDTNKWTLIESLRRPRWGCFACGFEGKLYVMGGRSSFTIGNSKFVDVYNTEKHSWCEMKNGCVMVTAHAVLENKLFCMEWKNQRKLAIFSPEDSSWGMVAVPLTGSSCAGFRFGILDGKLLLFPLEAKNTFQTLLYDPNADIGSEWQISDIKPSGLCLCSVTIKA 370
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal4g1646 370 PANTHER KELCH REPEAT F-BOX PROTEIN 1 370 - -
Lal4g1646 370 Pfam F-box domain 36 73 IPR001810 GO:0005515
Lal4g1646 370 SUPERFAMILY Kelch motif 84 345 IPR015915 GO:0005515
Lal4g1646 370 SMART kelc_smart 184 231 IPR006652 GO:0005515
Lal4g1646 370 SMART kelc_smart 232 280 IPR006652 GO:0005515
Lal4g1646 370 SMART kelc_smart 133 183 IPR006652 GO:0005515
Lal4g1646 370 PANTHER OS02G0202900 PROTEIN 1 370 IPR045887 -
Lal4g1646 370 Gene3D - 71 367 IPR015915 GO:0005515
Lal4g1646 370 Pfam Kelch motif 221 265 IPR011498 GO:0005515
Lal4g1646 370 Pfam Kelch motif 123 170 IPR006652 GO:0005515
Lal4g1646 370 Pfam Kelch motif 172 217 IPR006652 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal4g1646 Lal-Chr4 20545478 20551989 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal4g1646 32 215 Miscellaneous Gene Families AT4G33900 27.778 2.47e-14 71.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal4g1646 - - gmx:100802912 613.224