Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal4g1639 ATGGCTCCGTATAATGAGGAAGGAGGAAAACCTCTACCAAAATTTGGGGAGTGGGATGTAAATGATCCAGCATCAGCTGAAGGATTCACTGTTATATTCAACAAGGCAAGAGATGAGAAGAAAATTGCTTCAAAATCTGGAAGATTTCCTTCACAAAGAAGATATGATTCTCGCAGCACCAAGGCTCAACATAAATTGAAACAATCCTTAAAGAAAAAATGGTTTTGCTTTGTCCCTTTGACAAAAGAATAA 252 0.373 MAPYNEEGGKPLPKFGEWDVNDPASAEGFTVIFNKARDEKKIASKSGRFPSQRRYDSRSTKAQHKLKQSLKKKWFCFVPLTKE 83
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal4g1639 83 PANTHER PROTEIN NOI4 6 76 - -
Lal4g1639 83 Pfam Cleavage site for pathogenic type III effector avirulence factor Avr 7 41 IPR008700 -
Lal4g1639 83 MobiDBLite consensus disorder prediction 43 62 - -
Lal4g1639 83 PANTHER RPM1-INTERACTING PROTEIN 4 (RIN4) FAMILY PROTEIN 6 76 IPR040387 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal4g1639 Lal-Chr4 20493656 20494378 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal4g1639 - - gmx:102669045 133.265