Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal4g1606 ATGTTCATTGAGAACTTTAAGGTTGATAGTCCTAATGTTAAGTACACCAACTCTGAGATTCAATCTGTGTACAATTATGAAACAACTGAACTTGTTCACAACAACAATGAGTGGATTGTGAAACCCAAAACTGTGAAATATGAGTTTAAAACTAACACCCATGTCCCTAAATTGGGGGTAATGCTTGTGGGGTGGGGTGGAAACAATGGTTCAACCCTCACTGGTGGTGTTATTGCTAATAGAGAGGGTATTTCATGGGCAACAAAGGACAAGATTCAACAAGCTAATTACTTTGGTTCTCTAACTCAAGCTTCAGCTATTAGAGTGGGGTCTTTCCAAGGAGAGGAAATTTATGCCCCATTCAAGAGCTTGCTTCCAATGGTCAACCCTGATGATATAGTATTTGGTGGATGGGATATCAGTAACATGAACCTGGCTGATGCAATGGGCAGAGCCAAGGTGTTTGATATTGAATTGCAGAAGCAATTGAGGCCTTACATGGAATCAATGCTTCCACTCCCTGGAATCTATGACCCTGATTTCATTGCTGCTAACCAAGGAGAACGTGCCAACAATGTTATCAAGGGCACTAAGAAAGAACAAATTCAACATATCATCAAAGACATTAAGGAGTTTAAGGAAGCTAACAAAGTAGACAGGGTTGTTGTTCTGTGGACTGCAAATACTGAGAGGTATAGTAATGTAGTTGTGGGACTAAATGACACCATGGAAAACCTCTTGGCTTCAGTGGACAGAAATGAGGCTGAGATTTCTCCTTCAACTTTGTATGCTTTGGCCTGTGTTAATGAAAATATTCCTTTCATCAATGGAAGCCCTCAGAATACTTTTGTTCCAGGGTTAATTGATCTTGCCATCAAGAAGAACAGCTTAATTGGTGGAGATGATTTCAAGAGTGGTCAAACCAAAATGAAGTCTGTTTTGGTTGATTTTCTTGTAGGGGCTGGTATCAAGCCAACATCAATTGTGAGTTATAACCATCTTGGAAACAATGATGGTATGAATCTCTCAGCACCACAAACATTTCGGTCGAAGGAAATCTCGAAGAGTAACGTTGTTGACGACATGGTCAACAGCAATGGCATCCTATTTGAGCCTGGTGAACATCCAGACCATGTAGTTGTGATCAAGTATGTGCCTTATGTGGCTGACAGCAAAAGAGCCATGGATGAATACACTTCAGAGATTTTCATGGGTGGAAGGAACACTATTGTGTTACACAACACATGTGAGGATTCTCTCTTGGCTGCTCCAATTATCTTGGACCTAGTCCTTCTTGCTGAACTCAGCACTAGAATCCAGTTCAAAAATGAAGCTGAGGGAAAATTTCACTCTTTCCACCCTGTTGCTACAATCCTCAGTTATCTTACCAAGGCTCCTTTGGTTCCACCTGGTACACCAGTGGTGAATGCTTTGTCTAAGCAGAGGGCTATGTTGGAGAACATCCTTAGAGCTTGTGTTGGATTGGCTCCTGAGAATAACATGATTCTTGAGTACAAGTGA 1521 0.4122 MFIENFKVDSPNVKYTNSEIQSVYNYETTELVHNNNEWIVKPKTVKYEFKTNTHVPKLGVMLVGWGGNNGSTLTGGVIANREGISWATKDKIQQANYFGSLTQASAIRVGSFQGEEIYAPFKSLLPMVNPDDIVFGGWDISNMNLADAMGRAKVFDIELQKQLRPYMESMLPLPGIYDPDFIAANQGERANNVIKGTKKEQIQHIIKDIKEFKEANKVDRVVVLWTANTERYSNVVVGLNDTMENLLASVDRNEAEISPSTLYALACVNENIPFINGSPQNTFVPGLIDLAIKKNSLIGGDDFKSGQTKMKSVLVDFLVGAGIKPTSIVSYNHLGNNDGMNLSAPQTFRSKEISKSNVVDDMVNSNGILFEPGEHPDHVVVIKYVPYVADSKRAMDEYTSEIFMGGRNTIVLHNTCEDSLLAAPIILDLVLLAELSTRIQFKNEAEGKFHSFHPVATILSYLTKAPLVPPGTPVVNALSKQRAMLENILRACVGLAPENNMILEYK 506
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal4g1606 506 Pfam Myo-inositol-1-phosphate synthase 58 490 IPR002587 GO:0004512|GO:0006021|GO:0008654
Lal4g1606 506 PIRSF Myoinositol-ppht_synth 46 506 IPR002587 GO:0004512|GO:0006021|GO:0008654
Lal4g1606 506 PANTHER MYO-INOSITOL-1 PHOSPHATE SYNTHASE 1 506 IPR002587 GO:0004512|GO:0006021|GO:0008654
Lal4g1606 506 PANTHER INOSITOL-3-PHOSPHATE SYNTHASE 1 506 - -
Lal4g1606 506 Gene3D - 1 351 - -
Lal4g1606 506 Gene3D - 378 506 - -
Lal4g1606 506 SUPERFAMILY Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain 305 418 - -
Lal4g1606 506 Pfam Myo-inositol-1-phosphate synthase 306 419 IPR013021 -
Lal4g1606 506 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 4 506 IPR036291 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal4g1606 Lal-Chr4 20235870 20239501 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal4g1606 K01858 - gmx:100800820 956.051
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal4g1606 4 20235870 20239501 Lal17g1615 17 17538580 17541844 LSH