Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal4g1526 ATGACTGGAATGGCAAAGGAGGAAGAGTCAGGTAGTCCTAGTTGGGGTGTGTCGTTTTTTACGCAGACAACCGAGGATGTGGCTAGAGCTGTCTCTGCTGCTATGAATTCTCCAAGGCCATCTGTGATATATTCGTCAAAAGATGATCAGGGTGGTAGTCAACTTAAAAGGTTGCAAAGTCAAGTTACGAAAATGATTAAAGGCTTTTCACGCACTCCTGAAGTAAAATATACAAATTACAATCCAGAAATACTTACAAGTCAGAAGCGCCAATGGGCTGCTAATTTTCAGTTGCAGAACATGGACCATAAATCTTGGAAGGAACCGAAACGGCTGTTTGAGAGCATAGTGGTCGTTGGTCTTCATCCTTGCTGTGATATCCAGGCACTGCAAAGGCAATATATTGTTAGAAAGTCTGAAGGATCTGGTAAATTGAGAAGTGCGCTTGGGTATCAGAATCCATCTCGTGTAGAATCCAACATTGAACCTCAGGTCTTATTTGTTTACCCTCCAGAAAAACATCTGCCTATTAAAGACAAGGATCTTCTGTCTTTCTGCTTCCCAGGAGGCTTGGAGGTCCGTGCTGTTGAGAGAACTCCTTCCATGAGTGAGTTGAATGAAATTCTTTATGGGCAGGAGCACCTCAAACAAAGGGATCTGTCATTTGTATTTAGGTTGCAGGGTGCTGATAATTCAACACTTTATGGGTGCTGTGTCCTTGTTGAAGAGTTAGTGCAAAAGCCCTCTGGATTCCTCTCCCTGATTTCTGATAAGCAGTCGTCTAACTCTTCTTTGAGACGCCATATATTAACTACACAGAGATGTTACTGCATTCTCTCAAGACTTCCATTTTTTGAATTGCACTTTAGTGTATTGAACAGTATCTTCACTCAAGAAAGGCTCGAGCGGTTGACTAAAAGTGTTGGAGATTTAAATTTGGAATTTATTGAGGGTGGAGATGAACAAGAAAAATCAGAGGGTTTGTTGGTGAATGATACACCAATTGAAGACGGACTTGGTGGAAACCAAAGAATTTGTCAATCAAGGTTAAGAAATTCCTCTCCTGAATTCATTCAGGGTGATGATAATCATACAGAGCAACAGATGGCTACTGGGGAGCTGCATACATTTAATGAGACAGTCCAAGGAGACAATGTTGTGCTAATTGATCTGGTAACTGAAAGAAAAACTGCCAAAGAAGAATCTGTCCCTACGAACACTGAAGATAGTGATTTGTATGTTGATTCTTTTGTCACAAACAAACAATCAGAAGATAGGCGTTTACCAAATGCTATTTTGCCACTCCTGCGTCATTGCCAGTATGAAAGTTCTGAATCTTCCTGCAGTTTTCAAGGTTCACCCTGCGAAGACAGAAGTTTTAGGAGTGATGCTGATGACACTGAGACAGAAGATGCCTCTACCTCTGGACAGGAAGATTTAAATGAGTTCCATGATGTTCTTGAATGGGCCAAGGCAAATAACTGTGGTCCATTACAAATTATAATTAAATATTACCGTTTAAGTTGCCCTGCAAGGGGCTCAGCGATTAGATTTCATCCTTTGGAGCATTTGCATCCCTTGGAGTATCATAGACCAGATGAGGCAGTTCTACGTCTCACTGGTACAAGGGGTGATTTGAAATCTTGCGGTGCAAGTCTGGAATTAGCTCAGGTATATAACTCTCTTCTAGCCGAGGAGGAGGCAACTGCATTATCTATATGGGCTGTGGCATGCATATGTGGTACCTTGAGACTTGAACATGTGTTAACATTCTTTGCAGCGGCTCTGCTGGAGAAACAGATAGTTGTTGTCTGTTCTAATTTGGGAATTCTATCTGCTTCAGTTTTATCTGTTATTCCACTGATCAGGCCCTACAGGTGGCAAAGCCTTCTAATGCCGGTTTTACCAAATGATATGCTTGGATTTTTGGATGCACCTGTCCCATACATAGTTGGTATCAGGAACAGGACAAATGAGGTTCAATCAAAGTTAACTAATGTTGTTCTGATTGATGCCAATATAAACCAGGTGAAGTCGCCGACAATTCCACCACTGCCAAGACACAAAGAGCTAATCTCTTCTTTGCGTCCTTATCATGCAACTCTTGTGGGGGAAAGTTACTTGGGCAGGAGAAGACCAGTCTACGAATGCACGGAAGTGCAGGTTGAAGCTGCCAAAGGGTTCTTGTCGGTGTTAAGATCCTACTTGGATTCACTTTGCTGTAACATTCGATCTCATACAATAACCAATGTACAATCCAATGATGACAAGGTCTCCCTTCTTTTGAAGGAGAGTTTCATTGACTCTTTTCCTTATCGTGATCGGCCTTTCATGAAGCATTTAGTGGATACACAACTCTTCTCTGTGCATACAGATCTTGTTCTGTCTTTCTTCCAAAAGGAATAA 2406 0.4173 MTGMAKEEESGSPSWGVSFFTQTTEDVARAVSAAMNSPRPSVIYSSKDDQGGSQLKRLQSQVTKMIKGFSRTPEVKYTNYNPEILTSQKRQWAANFQLQNMDHKSWKEPKRLFESIVVVGLHPCCDIQALQRQYIVRKSEGSGKLRSALGYQNPSRVESNIEPQVLFVYPPEKHLPIKDKDLLSFCFPGGLEVRAVERTPSMSELNEILYGQEHLKQRDLSFVFRLQGADNSTLYGCCVLVEELVQKPSGFLSLISDKQSSNSSLRRHILTTQRCYCILSRLPFFELHFSVLNSIFTQERLERLTKSVGDLNLEFIEGGDEQEKSEGLLVNDTPIEDGLGGNQRICQSRLRNSSPEFIQGDDNHTEQQMATGELHTFNETVQGDNVVLIDLVTERKTAKEESVPTNTEDSDLYVDSFVTNKQSEDRRLPNAILPLLRHCQYESSESSCSFQGSPCEDRSFRSDADDTETEDASTSGQEDLNEFHDVLEWAKANNCGPLQIIIKYYRLSCPARGSAIRFHPLEHLHPLEYHRPDEAVLRLTGTRGDLKSCGASLELAQVYNSLLAEEEATALSIWAVACICGTLRLEHVLTFFAAALLEKQIVVVCSNLGILSASVLSVIPLIRPYRWQSLLMPVLPNDMLGFLDAPVPYIVGIRNRTNEVQSKLTNVVLIDANINQVKSPTIPPLPRHKELISSLRPYHATLVGESYLGRRRPVYECTEVQVEAAKGFLSVLRSYLDSLCCNIRSHTITNVQSNDDKVSLLLKESFIDSFPYRDRPFMKHLVDTQLFSVHTDLVLSFFQKE 801
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal4g1526 801 Gene3D - 572 737 IPR043153 -
Lal4g1526 801 Pfam uDENN domain 163 240 IPR005113 -
Lal4g1526 801 Pfam DENN (AEX-3) domain 574 671 IPR001194 -
Lal4g1526 801 SMART uDENN_cls 109 242 IPR005113 -
Lal4g1526 801 MobiDBLite consensus disorder prediction 445 477 - -
Lal4g1526 801 Gene3D - 100 310 - -
Lal4g1526 801 ProSiteProfiles Tripartite DENN domain profile. 147 801 IPR037516 -
Lal4g1526 801 PANTHER DENN (AEX-3) DOMAIN PROTEIN 1 801 - -
Lal4g1526 801 PANTHER SUPPRESSION OF TUMORIGENICITY 5 ST5 1 801 - -
Lal4g1526 801 SMART DENN_cls 271 675 IPR001194 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal4g1526 Lal-Chr4 19367570 19378632 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal4g1526 - - gmx:100782148 1290.4
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal4g1526 4 19367570 19378632 Lal4g1526 4 19367570 19378632 ECH
Lal14g1654 14 16822983 16834909 Lal4g1526 4 19367570 19378632 PCT
Lal7g1056 7 16667768 16680337 Lal4g1526 4 19367570 19378632 PCT
Lal4g1526 4 19367570 19378632 Lal14g1654 14 16822983 16834909 PCT
Lal4g1526 4 19367570 19378632 Lal7g1056 7 16667768 16680337 PCT