Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal4g1516 ATGGAAAACCAAGTGATGGCACTAAAGGAGAAAGGTATTGATGCGGAATTTCTCTCCTCAACAAAAACTGCAGATGCAAAAAACAAGATTCATGAGGATCTTGGTTCTGGAAAACCTTCTACAAGGCTGCTATATGTGACTCCAGAGTTGATAGCAACACCAGGTTTTATGTCAAAGCTGACAAAAATTTATGATAGGGGGTTGCTAAGTCTTGTTGCCATTGATGAGGCACATTGCATCTCAACTTGGGGCCACGATTTCAGGAGGGGTAAGGTTGCATACGTGTATCCTCCCCACGCTCCACTAGAGGTCATGAGTTCATATATTGAGAACAATCTCTCTGCTTGCAAGAGTCAGGTGAGAGAGCCTTATGCAGTTGGTCTCCCTTTTGAGGGTGAATATCTGCACAACAGTAAGTTGGTCCAACTGAAGTCCAGGACATCTGTGTCTGTTATCTTTTCCTTCTTGACCTTTCTTTATCCAGTGTGTGAAAGTTCATTGGGTCTGTGGTTCCATAGACCTAGCTACCGTAAACTTTCATCTCTAAGAAGCCACCTCCCAGATGTACCAATACTAGCTCTGACTGCTACTGCTGCTCCTAAGGTTCAGAAGGATGTGGTAGAATCCTTGCAGATGCAAAATCCATTAATACTTAAATCTTCTTTTAATCGTCCAAACATATATTATGAAGTTCGATACAAAGATCTTTTAGACGATGCTTATGCTGATTTATCTAATACAATCAAATCTATGGGAGATGTCTGTGCAATAGTTTACTGCCTCGAACGATCGATGTGTGATGACTTGTCAGTTCGTCTATCCCATAATGGCATTTCCTGTGCTGCTTATCATGCAGGATTGAATAATAAAGTACGAACTTCTGTCTTAGATGATTGGATTTCTTCTAAGATACAAGTCGTTGTTGCCACAGTCGCTTTTGGGTATGTTTTCCCTTTTCACACAGCTGTATATGTGTTTGGGCTTAATCGTGGACAATCTCCACGCGTCTCCATCAAACATCATGTCACCACTGTTGTGATGGCCATGACTGTGGTTGACTTTGACTGCAGTGGTTGGAAACTGAAATCAGAAAAAATGTCCATGGTGGTTATGGTTGTGAAAATTAAGGCAGGGTTAGAGATGATTGCGTTGCATTACTTTATTGTCTTTTTTTTCCTGCATGGAGTTGTTCTGTTGCGTACAGTTACCGAGCCTTTGGTGTTCATTCAGAATGTTACTGAGCCTTTGGTGTCATTCAGAATGGGCATTGATAGAAAGGACGTCAGAATTGTGTGCCACTTCAACATTCCAAAGTCAATGGAATCATTCTATCAAGAGTCAGGTAGGGCAGGACGTGATCAATTGCCCTCTACAAGTCTGTTGTACTATGGGGTAGATGATCGCAAAAAAATGGAATTTATATTACGCAACTCTGGAAGCAAGAAGCTACAATCATCAAGTTCACAACAAGATTCATCCAAAAGGTCCCTGACAGAATTTAATCAGATGGTTGAATATTGTGATGGATCTGGATGTCGTAGGAAAAGAATTCTCGAGAGTTTTGGGGAACAGGTAACTGCATCACTGTGTGGAAAAACATGCGATGCCTGCAGACATCCAAACTTAGTTGCCAGATATTTGGAGGATCTCAAAACTGCCTGTGTTCTACGCCAGAAAATTGGTTCCTCTCCAATTTTTATCACCAGCTCCACTGCCACAATCGACAGAGAACAGTTATCCGAATTCTGGAATCGTGGCGATGAAGCAAGTGGATCAGAGGAAGAAATATCTGACTCAGATGATGGTAATGAGGTTGTGAACAACCTAACCAGGTCAAAGCTTCAATCCAGATCGGGAGTGAATGAAAAGCTTGCATTGTTACAACGTGCAGAAGAAAACTTCTATCGAAATAAGAACACTGATAAACAGAGCAAAAAAGTTGAGAGCAATGCTATTTCCGATACGATGCGAGGAGCGAGCAGGCAAAGATTACAAAATGCTCTAAAACAGGCCCAGCAAAGGCTTCATAACTTCAAGATTGAAGTAGAAACATCAGCATCTCTCCTTGAAGAAGAATGCTACAAGAAATATGGCAAGGCTGGCAAATCGTTCTATTATTCTCAAGTGGCTAGTACTGTAAGGTGGCTGACAACTACAAGTCCTGACAATCTGATAAACCGACTTGGTGCAATGAATGCTTCCACATCGATCAGTGTCTCGCCTAAAGCGGAGAATTCACTCACACCACCCGCTTTTGATCCTAATGCAAAAGAAGATACAAGCAATGAACTCTCAGACAATGCTAGATTAGAAACTGCGGCCTGTGCTATGCCACTAGAAAATTATTCCTTTGATACAAAGTTGCCAGAAATACCATCCTTCTCTGAATTTGTCAACAGTAGGAAGGAAAAAGGGGACCAGTTAAGGGACACAAAAAAGTATTCACCAAGAGTAGAAAAAAAGATGAGGTTAGAGTAG 2478 0.4149 MENQVMALKEKGIDAEFLSSTKTADAKNKIHEDLGSGKPSTRLLYVTPELIATPGFMSKLTKIYDRGLLSLVAIDEAHCISTWGHDFRRGKVAYVYPPHAPLEVMSSYIENNLSACKSQVREPYAVGLPFEGEYLHNSKLVQLKSRTSVSVIFSFLTFLYPVCESSLGLWFHRPSYRKLSSLRSHLPDVPILALTATAAPKVQKDVVESLQMQNPLILKSSFNRPNIYYEVRYKDLLDDAYADLSNTIKSMGDVCAIVYCLERSMCDDLSVRLSHNGISCAAYHAGLNNKVRTSVLDDWISSKIQVVVATVAFGYVFPFHTAVYVFGLNRGQSPRVSIKHHVTTVVMAMTVVDFDCSGWKLKSEKMSMVVMVVKIKAGLEMIALHYFIVFFFLHGVVLLRTVTEPLVFIQNVTEPLVSFRMGIDRKDVRIVCHFNIPKSMESFYQESGRAGRDQLPSTSLLYYGVDDRKKMEFILRNSGSKKLQSSSSQQDSSKRSLTEFNQMVEYCDGSGCRRKRILESFGEQVTASLCGKTCDACRHPNLVARYLEDLKTACVLRQKIGSSPIFITSSTATIDREQLSEFWNRGDEASGSEEEISDSDDGNEVVNNLTRSKLQSRSGVNEKLALLQRAEENFYRNKNTDKQSKKVESNAISDTMRGASRQRLQNALKQAQQRLHNFKIEVETSASLLEEECYKKYGKAGKSFYYSQVASTVRWLTTTSPDNLINRLGAMNASTSISVSPKAENSLTPPAFDPNAKEDTSNELSDNARLETAACAMPLENYSFDTKLPEIPSFSEFVNSRKEKGDQLRDTKKYSPRVEKKMRLE 825
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal4g1516 825 PANTHER ATP-DEPENDENT DNA HELICASE Q-LIKE 3 1 88 - -
Lal4g1516 825 PANTHER ATP-DEPENDENT DNA HELICASE Q-LIKE 3 163 335 - -
Lal4g1516 825 PANTHER ATP-DEPENDENT DNA HELICASE Q-LIKE 3 417 809 - -
Lal4g1516 825 MobiDBLite consensus disorder prediction 740 766 - -
Lal4g1516 825 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 2 88 IPR027417 -
Lal4g1516 825 Gene3D - 224 556 IPR027417 -
Lal4g1516 825 Coils Coil 661 681 - -
Lal4g1516 825 MobiDBLite consensus disorder prediction 795 825 - -
Lal4g1516 825 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 222 539 IPR027417 -
Lal4g1516 825 PANTHER DNA HELICASE RECQ FAMILY MEMBER 163 335 - -
Lal4g1516 825 PANTHER DNA HELICASE RECQ FAMILY MEMBER 1 88 - -
Lal4g1516 825 PANTHER DNA HELICASE RECQ FAMILY MEMBER 417 809 - -
Lal4g1516 825 Gene3D - 163 223 IPR027417 -
Lal4g1516 825 Gene3D - 1 92 IPR027417 -
Lal4g1516 825 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 247 494 IPR001650 -
Lal4g1516 825 Pfam RecQ zinc-binding 467 538 IPR032284 -
Lal4g1516 825 SMART helicmild6 267 454 IPR001650 -
Lal4g1516 825 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 1 216 IPR014001 -
Lal4g1516 825 MobiDBLite consensus disorder prediction 797 825 - -
Lal4g1516 825 Pfam Helicase conserved C-terminal domain 252 452 IPR001650 -
Lal4g1516 825 MobiDBLite consensus disorder prediction 585 605 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal4g1516 Lal-Chr4 19313873 19322960 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal4g1516 - K10901 pper:18769230 680.248
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal4g1516 4 19313873 19322960 Lal4g1516 4 19313873 19322960 ECH