Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal4g1499 ATGAAAACGGTACCGTTTGGGAGAGGCGGAACCGGAGAACTGAACTCGCCGAGAAATCAGGGATACTCGTCCTCCACGCCGGTGGTGATGGGAGGTCATGCCTATGGTGCAATGTTGCCGAAATTCCTCAACGATCTACGAAGCAATCACCACCAAGAGTTAGTTGAGATCACTCTAGAGCTAGAAGACAACGCTGTTACGCTTTGCAATGTTGCTCCATCAACCGGTAATGCTTCACCTTCTCCGTCGTCGAATCATGTAGCCGGAGATGAAGTTGACGGCGGAGGAGGAAGTGGCAGTGTTTCTTTTTCGAGGAGCCACTCGATAACGTCGAGGATTCGGATGAAGTTGCCGTGGCTAAGATCGATGTCGTTGCGGAGCTCAGGTTCTTCGGAGAGTGTAGCTACGGTGGAGGATCCGGTGGTGGCGGCGCGAAATGCTCGGAAAATGATAGGCAAGCTTGAACGAACGAGATCGAGAGCGCAGAGAGCTTTGAAAGGATTGAGATTCATCAGTGAGAAGGAAGAAGCGACGGAGGAGATGTGGAAGAAGGTGGAAGAGAGGTTCAAGTTGCTCGGAAAAGATGGTTTTCTCGCTAGAGAAGATTTTGGTGAATGCATCGGGATGGAGAATTCGAAGGAATTTGCATTGGGTATATTTGATGCATTGGCTAGAAAAAAAGAAAGGAAAGTGAGCAAAATAACCAAAGAAGAATTGCATCAATTCTGGTTGCAAATTTCTGATCAGAGCTTTGATGCTCGGCTTCAGATTTTCTTTGACATGGCAGACAGTAATGATGATGGAAGAATTACTAGGGAGGAAATACAGGAGCTCATAATGCTGAGTGCTTCTGCAAACAAGCTATCGAAACTAAAAGAACAGGCCGAAGGATATGCTGCGTTAATAATGGAAGAATTGGATCCAGAAAACCTTGGTTATATCGAGTTATGGCAGTTAGAAATGTTGTTACTACAAAGGGATTGCTACATGAACTATAGCAGACAACACAGCACCACAAGTGTAAGCTGGAGTCAGAATCTGACCGAATTGAAGACCAGAAATGTGATCCAAAGATTGTGCAAGACACTCCAATCTCTTGCATCACAATATTGGAGAAGAGGGTGGATTTTGATATTATGGTTGTTAACCATTGCTTGTCTTTTTGCATGGAAATTTTACCAATATAGAAAAAAATCAACTTTCCAAATCATGAGTTATTGTTTACCAATAGCCAAAGGTGCTGCAGAGACTCTCAAGCTTAACATGGCTCTTATCCTTTTACCAGTTTGTGGAAACACATTGACATGGCTTCGTTCCACAAGAGCTAGGAAATTTGTTCCCTTTGATGACAATATTAATTTCCACAAGATAATTGCAGTTGCCATATTGGTTGGAATTGCTGTTCATGCATGCACTCATCTAGCATGTGATTTCCCACTTCTTATAAACTCATCACCAGAAATGTTTTCACTTATATCTTCAGAATTCAATAACAAAAAGCCAACATATAAATCACTTTTGACTGGTATTGAAGGAGTAACTGGAATCACAATGGTTTCATTGATGGCTATCTCTTTTACATTTGCAAGTCACTACTTCAGAAAAAATGCAGTAAGACTTCCACCACCCTTCAACAGACTCACAGGTTTTAATGCATTCTGGTATTCACACCATCTTCTGGGTCTTGTCTATGTTCTTCTGCTTATTCATGGATCTTCCTTGAATTTAACACATCACTGGTATCAGAAAACTACGTGGATGTATATCTCTGTTCCACTGTTGCTGTATGTAGCAGAACGTGCTCTTCGAACTTGTAGATCAGAGCATTATTCAGTAAAAGTTCTGAAGGTTTCAGTGCTACCAGGGAATGTCTTTAGCTTGATCATGTCCAAGCCAAATGGATTCAAATACAAGAGTGGACAGCACCCATTCTCCATTACCTCAGCACCAGGAGATGAGTACCTGACCGTTCATATTCGCACAGTCGGAGACTGGACACAAGCACTTAAGCTGCATTTTACCAAAGATGACAATTTACCTTCAGCTAATGGTTCAGCAACACTTGATGAACTAGTGGAAATGGATCAAAGAGGACAGCCGAGACTGCTTGTCGATGGCCCTTATGGAGCCCCAGCACAAGATTACCAGAATTATGATGTACTACTACTCATAGGATTAGGAATCGGAGCAACACCATTCATTAGCATTCTCAGAGATCTTCTCAACCACACAAGAACAAGCGATGAACATGCGGAGTCAAACATAGAAACAAGCAGATCAGATGGGAGCTCCAGTAGTTTTACATCTTCAAATTTGACACCAGATGGAAATAAGAGATCACAGAGGACTACAAATGCTTATTTCTACTGGGTTACCAGGGAACCTGAATCTTTTGAATGGTTTAAAGGAGTAATGGATGAAGTTGCAGAAATGGACCACAAAGGTCAAATTGAACTTCACAACCATCTTACTAGTGTTTACGAGGAAGGGGATGCAAGATCGACCTTAATCAAAATGATCCAAGCATTAAACCATGCCAAACATGGCGTTGACATCCTATCAGGCACTCGAGTAAGGACACACTTTGCTAGGCCTAATTGGAATGAAGTTTTCACCAAGTTAGCATCCAAACATCCCTGTTCTACAGTAGGGGTGTTCTATTGTGGGATGCCCGTTTTGGCAAAGGAGCTAAAGAAGCTATCACTTGAGCAGAGCCACAAGACAACTACACGCTTCGATTTTCACAAGGAGTATTTCTAA 2760 0.4239 MKTVPFGRGGTGELNSPRNQGYSSSTPVVMGGHAYGAMLPKFLNDLRSNHHQELVEITLELEDNAVTLCNVAPSTGNASPSPSSNHVAGDEVDGGGGSGSVSFSRSHSITSRIRMKLPWLRSMSLRSSGSSESVATVEDPVVAARNARKMIGKLERTRSRAQRALKGLRFISEKEEATEEMWKKVEERFKLLGKDGFLAREDFGECIGMENSKEFALGIFDALARKKERKVSKITKEELHQFWLQISDQSFDARLQIFFDMADSNDDGRITREEIQELIMLSASANKLSKLKEQAEGYAALIMEELDPENLGYIELWQLEMLLLQRDCYMNYSRQHSTTSVSWSQNLTELKTRNVIQRLCKTLQSLASQYWRRGWILILWLLTIACLFAWKFYQYRKKSTFQIMSYCLPIAKGAAETLKLNMALILLPVCGNTLTWLRSTRARKFVPFDDNINFHKIIAVAILVGIAVHACTHLACDFPLLINSSPEMFSLISSEFNNKKPTYKSLLTGIEGVTGITMVSLMAISFTFASHYFRKNAVRLPPPFNRLTGFNAFWYSHHLLGLVYVLLLIHGSSLNLTHHWYQKTTWMYISVPLLLYVAERALRTCRSEHYSVKVLKVSVLPGNVFSLIMSKPNGFKYKSGQHPFSITSAPGDEYLTVHIRTVGDWTQALKLHFTKDDNLPSANGSATLDELVEMDQRGQPRLLVDGPYGAPAQDYQNYDVLLLIGLGIGATPFISILRDLLNHTRTSDEHAESNIETSRSDGSSSSFTSSNLTPDGNKRSQRTTNAYFYWVTREPESFEWFKGVMDEVAEMDHKGQIELHNHLTSVYEEGDARSTLIKMIQALNHAKHGVDILSGTRVRTHFARPNWNEVFTKLASKHPCSTVGVFYCGMPVLAKELKKLSLEQSHKTTTRFDFHKEYF 919
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal4g1499 919 ProSiteProfiles EF-hand calcium-binding domain profile. 250 285 IPR002048 GO:0005509
Lal4g1499 919 CDD NOX_Duox_like_FAD_NADP 614 871 - -
Lal4g1499 919 SUPERFAMILY EF-hand 170 337 IPR011992 -
Lal4g1499 919 Gene3D - 154 271 - -
Lal4g1499 919 MobiDBLite consensus disorder prediction 13 27 - -
Lal4g1499 919 SFLD NADPH oxidase subgroup (NOX) 151 919 - -
Lal4g1499 919 SUPERFAMILY Ferredoxin reductase-like, C-terminal NADP-linked domain 715 919 IPR039261 -
Lal4g1499 919 Pfam FAD-binding domain 610 711 IPR013112 GO:0016491
Lal4g1499 919 MobiDBLite consensus disorder prediction 757 779 - -
Lal4g1499 919 Gene3D - 709 919 IPR039261 -
Lal4g1499 919 Pfam Respiratory burst NADPH oxidase 153 253 IPR013623 GO:0004601|GO:0050664
Lal4g1499 919 MobiDBLite consensus disorder prediction 72 86 - -
Lal4g1499 919 Gene3D Translation factors 597 681 - -
Lal4g1499 919 MobiDBLite consensus disorder prediction 1 27 - -
Lal4g1499 919 ProSiteProfiles Ferredoxin reductase-type FAD binding domain profile. 552 714 IPR017927 GO:0016491
Lal4g1499 919 MobiDBLite consensus disorder prediction 748 779 - -
Lal4g1499 919 SUPERFAMILY Riboflavin synthase domain-like 610 711 IPR017938 -
Lal4g1499 919 PRINTS Cytochrome B-245 heavy chain signature 458 476 IPR000778 GO:0016020|GO:0016491
Lal4g1499 919 PRINTS Cytochrome B-245 heavy chain signature 550 570 IPR000778 GO:0016020|GO:0016491
Lal4g1499 919 PRINTS Cytochrome B-245 heavy chain signature 879 897 IPR000778 GO:0016020|GO:0016491
Lal4g1499 919 MobiDBLite consensus disorder prediction 72 103 - -
Lal4g1499 919 CDD EFh 233 280 IPR002048 GO:0005509
Lal4g1499 919 Pfam Ferric reductase like transmembrane component 413 568 IPR013130 -
Lal4g1499 919 Pfam Ferric reductase NAD binding domain 718 901 IPR013121 GO:0016491
Lal4g1499 919 PANTHER NADPH OXIDASE 43 919 - -
Lal4g1499 919 Coils Coil 144 164 - -
Lal4g1499 919 PANTHER RESPIRATORY BURST OXIDASE HOMOLOG PROTEIN E 43 919 - -
Lal4g1499 919 ProSitePatterns EF-hand calcium-binding domain. 263 275 IPR018247 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal4g1499 Lal-Chr4 19160062 19171056 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal4g1499 21 919 Miscellaneous Gene Families AT1G19230 59.958 0.0 1100
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal4g1499 K13447 - gmx:100805697 1405.96
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal4g1499 4 19160062 19171056 Lal4g1499 4 19160062 19171056 ECH