Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal4g1459 ATGAGTTTCAATTACAACAAGTATCTTCTGATAGTGTTGTTCTTGTGGGCATGGTTTGAATCCTTAGCTTTTACAATTTCTAATGATGGGTCAATGAGGGTTACTCTTAAAAGAAAGATCTTAGACACAAAAAGTCTTGGTGCTGCAAGAATCAAAGAAATTGTTCATCACAATGGTTTAAGGAGTATTGATAAAAATGATTCATCAGAAAATGTATTGTATCTTAAGAATTATGATGCACAATATTTTGGTGAAATTAGTATTGGTTCACCTCCACAATACTTTAATGTTGTGTTTGACACTGGAAGTTCAAATCTTTGGGTCCCATCTTCTAGATGCATTTTCTCTATTTCTTGCTATTTTCATTCCAAATATAGATCAGGGATATCTAGCACCTATGCTGAAATTGGCACACCATGCAAAATCCCTTATGGTGATGGCTCCATTTCTGGGTTCTTCAGCCAAGATAATGTAAAAGTTGGGGATATCATTATCAAAGATCAAGAATTTGCTGAAATTACATGGGAAGGATCTTCTGAACTTTTATCTCTACCTATTGATGGGATACTTGGACTTGGATTCCAAGATATTTCAATTGGAAAAGTCACACCACTGTGGTATAATATGATAGAACAAGGGTACATACATCAAAAGGTTGTCTCTCTTTGGCTAAATAAAGACCCATTGGCAAATATAGGTGGTGAGATTGTGTTTGGTGGTATTGACATTAAGCACTTTAGAGGTGACCACACATATGTTCCAATTTCTCAAAAGGGTTATTGGCAGATTGAAGTTGGGGATGTTCTCATTGGAAATAATTCTACAGGGTTATGTGATGGTGGCTGTGCTGCAATTGTGGACTCAGGAACATCCTTAATTGCTGGTCCAACTACTATAGTGACTCAAATTAATCATGCCATTAGAGCAGAAGGATATGTGAGTTATGAGTGTAAAAACATTATCCATTACTATGGGAATTTGATATGGGAGTTCTTGATTTCCGGGTTAAATCCTGAAATCATATGTGTCAACATTGGGCTATGTTCACATAATGGATCTCATATAAAGGATGATGTTATTGAAACAGTGGTGCATAATGAAAATCATGATGGATCATCAACAAGGGAGAGCCCCTTTTGTACCTTTTGCAATATGATTGTTGTTTGGATCCAAACTCAGCTTAAGCAAACTAATGTGAAGGATCATATATTATATTATGTGGATGAGCTGTGTGAGAGGCTTCCAAATCCAGTGGGACATTCAGTTATAGACTGCAATAGTGTTTCAACTATGCCACATGTTACATTCACTATTGGAAACAAATCCTTTGCTCTCTCTCCAGAACAGTATATCCTAAGAGTTGGAGAAGGTTATTCTGCTATCTGCTATGGCAGTTTTGTTGCTTTAGATGTACCTTCCCCCCAAGGTCCCCTATGGGTTCTTGGAGACATTTTCTTAGGGGCATATCATACAGTGTTTGACTATGGAAATCTCCTTATAGGATTTGCAGAAAGTGCATAA 1521 0.3675 MSFNYNKYLLIVLFLWAWFESLAFTISNDGSMRVTLKRKILDTKSLGAARIKEIVHHNGLRSIDKNDSSENVLYLKNYDAQYFGEISIGSPPQYFNVVFDTGSSNLWVPSSRCIFSISCYFHSKYRSGISSTYAEIGTPCKIPYGDGSISGFFSQDNVKVGDIIIKDQEFAEITWEGSSELLSLPIDGILGLGFQDISIGKVTPLWYNMIEQGYIHQKVVSLWLNKDPLANIGGEIVFGGIDIKHFRGDHTYVPISQKGYWQIEVGDVLIGNNSTGLCDGGCAAIVDSGTSLIAGPTTIVTQINHAIRAEGYVSYECKNIIHYYGNLIWEFLISGLNPEIICVNIGLCSHNGSHIKDDVIETVVHNENHDGSSTRESPFCTFCNMIVVWIQTQLKQTNVKDHILYYVDELCERLPNPVGHSVIDCNSVSTMPHVTFTIGNKSFALSPEQYILRVGEGYSAICYGSFVALDVPSPQGPLWVLGDIFLGAYHTVFDYGNLLIGFAESA 506
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal4g1459 506 Pfam Saposin-like type B, region 1 378 415 IPR007856 GO:0006629
Lal4g1459 506 ProSiteProfiles Saposin B type domain profile. 376 417 IPR008139 -
Lal4g1459 506 Pfam Eukaryotic aspartyl protease 81 504 IPR033121 -
Lal4g1459 506 PANTHER BETA-SITE APP-CLEAVING ENZYME, ISOFORM A-RELATED 8 506 IPR001461 GO:0004190|GO:0006508
Lal4g1459 506 Gene3D Acid Proteases 241 506 IPR021109 -
Lal4g1459 506 ProSitePatterns Eukaryotic and viral aspartyl proteases active site. 97 108 IPR001969 GO:0004190|GO:0006508
Lal4g1459 506 ProSiteProfiles Peptidase family A1 domain profile. 82 503 IPR033121 -
Lal4g1459 506 SUPERFAMILY Saposin 313 415 IPR011001 -
Lal4g1459 506 ProSiteProfiles Saposin B type domain profile. 312 352 IPR008139 -
Lal4g1459 506 Gene3D - 312 415 - -
Lal4g1459 506 ProSitePatterns Eukaryotic and viral aspartyl proteases active site. 284 295 IPR001969 GO:0004190|GO:0006508
Lal4g1459 506 SUPERFAMILY Acid proteases 11 504 IPR021109 -
Lal4g1459 506 Pfam Saposin-like type B, region 2 316 348 IPR008138 -
Lal4g1459 506 PANTHER FUNGAL PROTEINASE A, ASPARTIC PROTEINASE SUPERFAMILY PROTEIN 8 506 - -
Lal4g1459 506 Gene3D Acid Proteases 32 240 IPR021109 -
Lal4g1459 506 PRINTS Pepsin (A1) aspartic protease family signature 88 108 IPR001461 GO:0004190|GO:0006508
Lal4g1459 506 PRINTS Pepsin (A1) aspartic protease family signature 234 247 IPR001461 GO:0004190|GO:0006508
Lal4g1459 506 PRINTS Pepsin (A1) aspartic protease family signature 284 295 IPR001461 GO:0004190|GO:0006508
Lal4g1459 506 PRINTS Pepsin (A1) aspartic protease family signature 479 494 IPR001461 GO:0004190|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal4g1459 Lal-Chr4 18748285 18753899 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal4g1459 K08245 - gmx:100500551 792.727