Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal4g1447 ATGACTAGAATTGAGTTAGTTTTCATTGCTACCCCAGCCATGGGAAACCTTGTTCCGATGGTGGAGTTCGCTAACCTCTTAACCAAACAGGACCCTAGATTCTCTGCAACCGTTCTTATAATCACAGTGCCACATCGACCAATCATCACCACTTACTTCAATTCCCTTTCTTCCTCATCCACCAACCTTCGATTCCTCCACCTCCCTACCGTAGACCCTCCCACACCAGATCAGTACCAAACCAATGTTGGTTTCATTTCCTTACTCATAGAGAAACACAAACACCGTGTCAAACACGCGCTCATCGACATCATCAAAACCGAGTCACCCTCCGATTCCGACTCTGTTCAACTCGCCGCGTTATTCGTCGACATGTTCACCACCGCCATCATCGACGTCGCCGCCGAACTCAACCTCCCTTCCTACCTCTTCTTCGCTTCTCCGGCGAGCTTCCTTGGTTTCACGCTTCACCTCTCACAAATCGAAACCGAGTTGACCGATTCAAACACCGAGTTCCGATTCCCGTGTTTCAAGAACTCGCTCCCCCGTTCCGTTTTCCCGAAACTCGTGTTCAACGAAAAAAACGGTTCTTCATGGCTTTCACACCATGCAAGAAGGTATAAAGAAACGAAGGGTATTATTGTAAATACGTTAGAGGAGCTTGAGCCTCACGCGCTTCAATCACTATACAATGATTCACAATTGCCACGTGTGTATCCAATTGGACCGGTTCTCGACCTTCACGGTTCGGCCCGATGGAACCCGAATGCGGTTCAGTATAAACGTATAATGGAGTGGTTAGATATGCAAACAAAATCATCCGTGGTTTTTCTATGCTTCGGTAGCATGGGAAGCCTAAGTGTGGGCCAAGTGGCCCAAATAGCCTTTGGGCTTGAACGGGCCGGATTTAGGTTCTTATGGGCTTTACGGGAGCCTCCGAAAGCCCAATTAGAGGACCCGAAGGACTATACAAACTACGACAATGTTTTGCCCGATGGGTTTTTGGAACGGACGGCCGAGATCGGTTTGGTTTGTGGGTGGGTCCCGCAAGCGAAGGTGCTGGCCCACAAAGCGGTTGGTGTGTTCGTGTCACATTGTGGTTGGAACTCAATACTAGAGAGCTTGTGGTACGAGGTACCAATTGCCACGTGGCCAATATATGCTGAACAACATATGAATGCGTTTGAGATGGTTAAGGAATTGGGATTAGCGGTGGAGATTAGGTTAGATTATAGGGACGGTGAGGATTTGGTGAAGGGAGAAGAAGTGGAAAGATGTGTTAGATATTTGATGAACGGTTGTGATGAGATTAGGAGAAAGGTTAAGGATATGGGTGAGAAGTGTAAAATGTCATTGATGAAAAATGGGTCATCTTATGTTAATTTAGTGTCACTTATTGAAGAATTAACAAGTTCATAA 1419 0.4665 MTRIELVFIATPAMGNLVPMVEFANLLTKQDPRFSATVLIITVPHRPIITTYFNSLSSSSTNLRFLHLPTVDPPTPDQYQTNVGFISLLIEKHKHRVKHALIDIIKTESPSDSDSVQLAALFVDMFTTAIIDVAAELNLPSYLFFASPASFLGFTLHLSQIETELTDSNTEFRFPCFKNSLPRSVFPKLVFNEKNGSSWLSHHARRYKETKGIIVNTLEELEPHALQSLYNDSQLPRVYPIGPVLDLHGSARWNPNAVQYKRIMEWLDMQTKSSVVFLCFGSMGSLSVGQVAQIAFGLERAGFRFLWALREPPKAQLEDPKDYTNYDNVLPDGFLERTAEIGLVCGWVPQAKVLAHKAVGVFVSHCGWNSILESLWYEVPIATWPIYAEQHMNAFEMVKELGLAVEIRLDYRDGEDLVKGEEVERCVRYLMNGCDEIRRKVKDMGEKCKMSLMKNGSSYVNLVSLIEELTSS 472
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal4g1447 472 PANTHER GLYCOSYLTRANSFERASE 4 470 - -
Lal4g1447 472 ProSitePatterns UDP-glycosyltransferases signature. 347 390 IPR035595 -
Lal4g1447 472 PANTHER GLYCOSYLTRANSFERASE 4 470 - -
Lal4g1447 472 Gene3D Glycogen Phosphorylase B; 252 450 - -
Lal4g1447 472 CDD GT1_Gtf-like 7 469 IPR002213 GO:0008194
Lal4g1447 472 Pfam UDP-glucoronosyl and UDP-glucosyl transferase 239 409 IPR002213 GO:0008194
Lal4g1447 472 Gene3D Glycogen Phosphorylase B; 7 462 - -
Lal4g1447 472 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 5 469 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal4g1447 Lal-Chr4 18642312 18643730 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal4g1447 3 472 Glycosyltransferase AT3G21760 43.522 2.16e-128 379
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal4g1447 - - ahf:112738420 673.315