Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal4g1436 ATGGAAGGAGGTATACCAGAAGCTGATATGTCTGCTTTCAGAGAATGTTTGTCTCTGTCTTGGAAGAATCCTTATGTTCTTCGCCTTGCTTTCTCTGCTGGAATTGGTGGTCTTCTCTTTGGTTACGACACCGGAGTTATATCTGGTGCACTTCTTTATATAAGAGATGAGTTCAAAGCAGTAGATAACAAGACTTGGCTTCAGGAAGCCATAGTGAGTGTGGCACTTGCTGGAGCAGTCATAGGAGCTGGAGTTGGTGGATGGATTAATGACAGATTTGGAAGAAAAGTAGCAATTATTATTGCAGATACTCTCTTTTTAGCAGGGTCAGTTATTATGGCTGCTGCTAAAAATCCAGAAATTCTTCTTGTTGGTAGAGTTTTTGTTGGCCTAGGTGTTGGAATGGCTTCAATGGCATCACCATTGTACATTTCAGAGACTTCCCCAACTAGAGTCAGAGGAGCCCTTGTAAGTCTCAACAGTTTTCTTATAACTGGAGGACAGTTCCTTTCTTACCTCATCAACTTGGCTTTCACTAAGGTACCAGGAACATGGAGGTGGATGTTAGGAGTAGCAGCAGCACCTGCTTTGATACAAATTGTACTAATGTTGTCACTCCCAGAATCACCACGTTGGCTATACCGTAAGGGCAAGGAGGAAGAAGGAAAAGCAATTCTAAAAAAGATTTACTCACCTGAGGATGTTGATGGTGAAATCCAAGCTTTGAAAGAATCAGTTGATATGGAAGTTAAGGACTCAGAATCATCAGAGAAGATCAGCATCATGAAACTTTTGAAAACAACATCTGTAAGAAGAGGTTTATATGCAGGTGTTGGCCTTCAAATCTTCCAACAATTTGTAGGCATCAACACTGTCATGTATTACAGCCCCAGCATTGTTCAGTTAGCTGGTTTTGCATCTAATAGGACAGCACTACTACTTTCACTCATCACATCAGGGCTTAATGCATTTGGCTCAATTTTGAGCATATACTTCATAGACAAGACTGGTAGGAAAAAACTTGCTCAGATCAGTTTGATTGGTGTTGTGGTTTCTCTTGCTGTCCTAACCGTTGCTTTTCGCGAAAGCGAAACTCACTCTCCTGTGGTTAGTTCCATTCAAACCTCACATTTCAATAACACATGCCCTGAGTTCAAAGCAGCTCTGAACCCTGGTGGATGGGATTGTATGAAATGCCTGAAGTCTTCATCACCTTGTGGTTTTTGTGCTGCTGCTAGTGATAAGCTCTTACCTGGGGCATGTTTGATCTCTGATGATACTACAAAGGGCATGTGTGGCAATGATCACAGGTCATGGTACACAAGAGGATGTCCTAGCAAATATGGTTGGACTGCCCTAGTTGGCCTTTCTCTCTACATCATTTTCTTCTCACCAGGGATGGGAACTGTTCCATGGGTTATCAACTCAGAGATATATCCCTTGAGGTATAGAGGAGTTTGTGGAGGAATAGCATCAACAGCTGTATGGGTTTCCAATCTCATTGTTTCCCAATCCTTCTTATCATTGACAGAAGCTATTGGGACAGCATGGACATTCATGATGTTTGGAATTGTTGCTGTTGTAGCCATTTTCTTTGTCATTATTTTTGTACCAGAGACCAAGGGTGTGCCAATGGAAGAAGTAGAGAAGATGTTGGAACAAAGATCTGTGCAGTTTAAGTTCTGGAAGAAGAGAAATTCTGGTTCAGAGAAATACTGA 1719 0.4177 MEGGIPEADMSAFRECLSLSWKNPYVLRLAFSAGIGGLLFGYDTGVISGALLYIRDEFKAVDNKTWLQEAIVSVALAGAVIGAGVGGWINDRFGRKVAIIIADTLFLAGSVIMAAAKNPEILLVGRVFVGLGVGMASMASPLYISETSPTRVRGALVSLNSFLITGGQFLSYLINLAFTKVPGTWRWMLGVAAAPALIQIVLMLSLPESPRWLYRKGKEEEGKAILKKIYSPEDVDGEIQALKESVDMEVKDSESSEKISIMKLLKTTSVRRGLYAGVGLQIFQQFVGINTVMYYSPSIVQLAGFASNRTALLLSLITSGLNAFGSILSIYFIDKTGRKKLAQISLIGVVVSLAVLTVAFRESETHSPVVSSIQTSHFNNTCPEFKAALNPGGWDCMKCLKSSSPCGFCAAASDKLLPGACLISDDTTKGMCGNDHRSWYTRGCPSKYGWTALVGLSLYIIFFSPGMGTVPWVINSEIYPLRYRGVCGGIASTAVWVSNLIVSQSFLSLTEAIGTAWTFMMFGIVAVVAIFFVIIFVPETKGVPMEEVEKMLEQRSVQFKFWKKRNSGSEKY 572
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal4g1436 572 PANTHER GENERAL SUBSTRATE TRANSPORTER 1 571 - -
Lal4g1436 572 CDD MFS_HMIT_like 32 539 - -
Lal4g1436 572 ProSitePatterns Sugar transport proteins signature 2. 128 153 IPR005829 GO:0016021|GO:0022857|GO:0055085
Lal4g1436 572 Pfam Sugar (and other) transporter 448 551 IPR005828 GO:0016021|GO:0022857|GO:0055085
Lal4g1436 572 Pfam Sugar (and other) transporter 30 365 IPR005828 GO:0016021|GO:0022857|GO:0055085
Lal4g1436 572 PANTHER PROTON MYO-INOSITOL COTRANSPORTER 1 571 - -
Lal4g1436 572 Gene3D MFS general substrate transporter like domains 20 378 IPR036259 -
Lal4g1436 572 PRINTS Sugar transporter signature 37 47 IPR003663 GO:0016020|GO:0022857|GO:0055085
Lal4g1436 572 PRINTS Sugar transporter signature 123 142 IPR003663 GO:0016020|GO:0022857|GO:0055085
Lal4g1436 572 PRINTS Sugar transporter signature 284 294 IPR003663 GO:0016020|GO:0022857|GO:0055085
Lal4g1436 572 PRINTS Sugar transporter signature 453 474 IPR003663 GO:0016020|GO:0022857|GO:0055085
Lal4g1436 572 PRINTS Sugar transporter signature 476 488 IPR003663 GO:0016020|GO:0022857|GO:0055085
Lal4g1436 572 ProSiteProfiles Major facilitator superfamily (MFS) profile. 29 541 IPR020846 GO:0022857
Lal4g1436 572 TIGRFAM SP: MFS transporter, sugar porter (SP) family 20 371 IPR003663 GO:0016020|GO:0022857|GO:0055085
Lal4g1436 572 Gene3D MFS general substrate transporter like domains 429 560 IPR036259 -
Lal4g1436 572 SUPERFAMILY MFS general substrate transporter 18 550 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal4g1436 Lal-Chr4 18533212 18540434 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal4g1436 1 571 Organic Solute Cotransporters AT1G30220 71.304 0.0 853
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal4g1436 K08150 - gmx:100796800 960.674