Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal4g1435 ATGGAAGGAGGAGCAGCAGAAGCTGATGCATCTGCTTTCAGAGAATGCTTATCTCTTTCATGGAAGAATCCTTATGTTCTTCGCCTTGCTTTTTCTGCTGCAATTGGAGGCCTTCTCTTTGGTTATGACACTGGAGTGATATCTGGGGCCCTTTTATATATCAGAGATGATTTTAAAGCTGTTGATAGAAAAACTTGGCTGCAGGAAGCCATAGTGAGTGTGGCACTTGCAGGAGCAATCATAGGAGCTTCAGTGGGAGGGTATATTAATGATCAATTTGGAAGAAGAAAAGGAATTATTTTTGCAGATACCCTTTTCTTTATTGGGTCTGTAATCATGGCTGCAGCTACAAATCCAACTATTCTTCTTATTGGTAGAGTTTTTGTTGGTTTTGGTGTTGGAATGACTTCAATGGCATCACCATTGTACATTTCAGAAGCATCTCCAACAAGAGTTAGAGGAGCCTTAGTTAGTCTCAATGGATTTCTTATCACAGGAGGACAATTCCTCTCCTATCTCATCAACTTGGCCTTCACAAATGCACCAGGAACATGGAGGTGGATGTTAGGAGTTGCAGCTGCACCAGCATTGATACAAATCATACTGATGTTTATGCTCCCAGAATCACCTCGTTGGCTATACAGAAAGGGTAAAGAAGAAGAAGCTAAACACATTTTAAGGAAGATATACCCTCCAGAAGATGTTGAAGATGAAATTAATACTTTGAAGGAATCTGTTGAAATGGAAATAAATGAAACTACTTCAGCTTCAGATAAGATAAGCATAATCAAACTTCTAAAAACAAAAACTGTTAGAAGAGGTTTATATGCAGGAATGGGCCTTCAAATTTTCCAACAATTTGTAGGCATCAACACTGTTATGTATTACAGCCCCACCATTGTTCAGTTAGCTGGTTATGCTTCCAATAGGGTAGCACTACTTCTTTCACTTGTCATAGCTGGTATAAATGCATTTGGTTCCATTATGAGCATATATTTCATTGATAAAACTGGAAGGAAAAAGCTTCTATTGTATAGTTTATTTGGTGTTATAGTATCCCTTGTTATTTTAACTGTTGTGTTTCATGAGACTACAACTCATTCTCCAAAAGTTAGTTCAATTGAAACCTCTCATTTCAATAACACATGTCCTGATTACAAGATTGCCTTCAACCCTAGTGAATGGGATTGTATGAAGTGCCTTAAGGCTTCTCCACAGTGTGGTTTCTGTGCTTCTGCATCTAATAAGCTCTTACCTGGAGCATGTTTGATATCCAATGACACAATAGAAGATCAATGCCACAAAGAACACAGGCTATGGTACACAAGAGGATGCCCTAGCAAATATGGTTGGGTTGCACTAGTTGCCCTAGCACTTTACATATTGTTCTTCTCACCAGGAATGGGAACTGTTCCATGGGTTGTTAACTCTGAGATATACCCTTTAAGGTATAGAGGAATTTGTGGAGGAATAGCATCTACATCAAATTGGATATCCAATCTCATTGTTGCACAATCCTTTCTATCATTGACAGAAGCTATTGGCACCTCATTCACATTCATGATATTCATATTCATCACCATTGCAGCCATTATCTTTGTTATTATTTTTGTGCCTGAAACTAAAGGACTTCCAATTGAGGAGGTTGAGAACATGTTGGAAAAAAGATCTCTTAACTTTAAGTTTTGGAAGAGAAGTTCTGACTCTGGTGAAGTATTGACACAAAAGAATCAATCATTTTGA 1743 0.381 MEGGAAEADASAFRECLSLSWKNPYVLRLAFSAAIGGLLFGYDTGVISGALLYIRDDFKAVDRKTWLQEAIVSVALAGAIIGASVGGYINDQFGRRKGIIFADTLFFIGSVIMAAATNPTILLIGRVFVGFGVGMTSMASPLYISEASPTRVRGALVSLNGFLITGGQFLSYLINLAFTNAPGTWRWMLGVAAAPALIQIILMFMLPESPRWLYRKGKEEEAKHILRKIYPPEDVEDEINTLKESVEMEINETTSASDKISIIKLLKTKTVRRGLYAGMGLQIFQQFVGINTVMYYSPTIVQLAGYASNRVALLLSLVIAGINAFGSIMSIYFIDKTGRKKLLLYSLFGVIVSLVILTVVFHETTTHSPKVSSIETSHFNNTCPDYKIAFNPSEWDCMKCLKASPQCGFCASASNKLLPGACLISNDTIEDQCHKEHRLWYTRGCPSKYGWVALVALALYILFFSPGMGTVPWVVNSEIYPLRYRGICGGIASTSNWISNLIVAQSFLSLTEAIGTSFTFMIFIFITIAAIIFVIIFVPETKGLPIEEVENMLEKRSLNFKFWKRSSDSGEVLTQKNQSF 580
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal4g1435 580 Gene3D MFS general substrate transporter like domains 20 380 IPR036259 -
Lal4g1435 580 PRINTS Sugar transporter signature 37 47 IPR003663 GO:0016020|GO:0022857|GO:0055085
Lal4g1435 580 PRINTS Sugar transporter signature 123 142 IPR003663 GO:0016020|GO:0022857|GO:0055085
Lal4g1435 580 PRINTS Sugar transporter signature 285 295 IPR003663 GO:0016020|GO:0022857|GO:0055085
Lal4g1435 580 PRINTS Sugar transporter signature 454 475 IPR003663 GO:0016020|GO:0022857|GO:0055085
Lal4g1435 580 PRINTS Sugar transporter signature 477 489 IPR003663 GO:0016020|GO:0022857|GO:0055085
Lal4g1435 580 Pfam Sugar (and other) transporter 448 552 IPR005828 GO:0016021|GO:0022857|GO:0055085
Lal4g1435 580 Pfam Sugar (and other) transporter 30 366 IPR005828 GO:0016021|GO:0022857|GO:0055085
Lal4g1435 580 TIGRFAM SP: MFS transporter, sugar porter (SP) family 18 373 IPR003663 GO:0016020|GO:0022857|GO:0055085
Lal4g1435 580 ProSitePatterns Sugar transport proteins signature 2. 128 153 IPR005829 GO:0016021|GO:0022857|GO:0055085
Lal4g1435 580 ProSiteProfiles Major facilitator superfamily (MFS) profile. 29 542 IPR020846 GO:0022857
Lal4g1435 580 PANTHER GENERAL SUBSTRATE TRANSPORTER 1 567 - -
Lal4g1435 580 PANTHER PROTON MYO-INOSITOL COTRANSPORTER 1 567 - -
Lal4g1435 580 SUPERFAMILY MFS general substrate transporter 19 550 IPR036259 -
Lal4g1435 580 Gene3D MFS general substrate transporter like domains 434 560 IPR036259 -
Lal4g1435 580 CDD MFS_HMIT_like 32 520 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal4g1435 Lal-Chr4 18514815 18519360 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal4g1435 1 579 Organic Solute Cotransporters AT1G30220 72.041 0.0 855
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal4g1435 K08150 - gmx:100783605 988.408