Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal4g1430 ATGAGTTTAGTGGCTGGTTCATATGAAAGATTCATTTGGGGTTTCACTCTCAAATCCCAATCCCTAACCCTAATCCCTCTTTTCTCTTACCCCTCTCACCTCTCCCTCATCAAATCCGTCGCTATCTCCGGCTCCGTCGTTGCTTCCGGCGGCGCCGATGACACTATCCACCTCTACAATCTCTCCGCCTCCTCCTCCCTCGGCTCCCTCCACCACCACTCCGCCACCGTCACTTCCCTCTCCTTCTACACCCCTCGTGACCTTCTCTTCCCCCGCAACCTCGTCTCCGCAGACGCCGACGGCACCGTCTGCCTCTACGACGCTGATGGCTTCGTCCACCTCAAGACTCTTCCCTCCGTCCACCGTAAGGCGGTTAATGACCTCGCGATTCATCCCTCCGGGAAGCTTGCGCTTTCCGTTGGCCGTGATGAGTGTCTTGCTATGGTGAATCTTGTTAGAGGGAGGAGAAGCTTTTGTTGTAGGTTGGATAAGGAAGCGAGTTTGGTTAAGTATGATTCGGATGGTGATAAGTTTTTTATGGCTATGGAGGAGAAGGTGTCTGTGCATGAAGCAGAGGATGCGCGGTTATTGCTTGAATTTGAATGCCAGAAGCGGGTTCTTTGCGCGGCATATGCTAAGAATGGACTTCTCTATACAGGTGGTGAGGACCGAAATATCACAGCATGGGACATAAAAACTGGAAAGGTTGCATATTCCATAGAAGAAGCACATGCAACCCGTGTAAAAGGTATTGTTGTCCTCACAGATAATGACGGTTCTGCAGGAGGTGATGATCCATACCTTGTAACATCTGCATCATCTGATGGGGTTATACGTGTCTGGGATGTTCGAATGGCTGCCACGGAGAAGCCAAATCCACTATCTGAGTGTAAGACACAGTCAAGATTGACGTGTCTTGCAGGGTCTACTCTAAAATTCAGAAAACCCGAAGCCGGAAAGAGTAAAACAAAAGATCAAGATCAAACATTGGAAGATTAA 999 0.4945 MSLVAGSYERFIWGFTLKSQSLTLIPLFSYPSHLSLIKSVAISGSVVASGGADDTIHLYNLSASSSLGSLHHHSATVTSLSFYTPRDLLFPRNLVSADADGTVCLYDADGFVHLKTLPSVHRKAVNDLAIHPSGKLALSVGRDECLAMVNLVRGRRSFCCRLDKEASLVKYDSDGDKFFMAMEEKVSVHEAEDARLLLEFECQKRVLCAAYAKNGLLYTGGEDRNITAWDIKTGKVAYSIEEAHATRVKGIVVLTDNDGSAGGDDPYLVTSASSDGVIRVWDVRMAATEKPNPLSECKTQSRLTCLAGSTLKFRKPEAGKSKTKDQDQTLED 332
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal4g1430 332 Gene3D - 3 158 IPR015943 GO:0005515
Lal4g1430 332 Gene3D - 181 313 IPR015943 GO:0005515
Lal4g1430 332 ProSiteProfiles Trp-Asp (WD) repeats profile. 216 239 IPR001680 GO:0005515
Lal4g1430 332 SMART WD40_4 233 282 IPR001680 GO:0005515
Lal4g1430 332 SMART WD40_4 110 150 IPR001680 GO:0005515
Lal4g1430 332 SMART WD40_4 193 230 IPR001680 GO:0005515
Lal4g1430 332 SMART WD40_4 63 107 IPR001680 GO:0005515
Lal4g1430 332 SMART WD40_4 23 60 IPR001680 GO:0005515
Lal4g1430 332 Pfam WD domain, G-beta repeat 67 107 IPR001680 GO:0005515
Lal4g1430 332 Pfam WD domain, G-beta repeat 264 282 IPR001680 GO:0005515
Lal4g1430 332 PRINTS G protein beta WD-40 repeat signature 94 108 IPR020472 -
Lal4g1430 332 PRINTS G protein beta WD-40 repeat signature 217 231 IPR020472 -
Lal4g1430 332 PRINTS G protein beta WD-40 repeat signature 269 283 IPR020472 -
Lal4g1430 332 SUPERFAMILY WD40 repeat-like 3 284 IPR036322 GO:0005515
Lal4g1430 332 PANTHER PAK1 INTERACTING PROTEIN 1 1 328 - -
Lal4g1430 332 ProSiteProfiles Trp-Asp (WD) repeats profile. 268 284 IPR001680 GO:0005515
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal4g1430 43 261 Miscellaneous Gene Families AT5G08390 24.229 9.72e-09 55.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal4g1430 K14830 - gmx:100777673 463.381