Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal4g1427 ATGGCAAATGAACAATTAAAGCCTGTTGCAACCCTTCTTTTGGGACTGAACTTTTGCATGTATGTCATAGTTTTAGGCATTGGTGCATGGGCTGTTAACAGGGCTATTGATCATGGTTTTGTTATAGGTGCAGGATTTGATCTTCCTGCTCATTTTTCACCCATATACTTCCCTATGGGAAATGCTGCTACTGGATTCTTTGTGACATTTGCTTTGATTGCCGGAGTTGTTGGTGCTGGATCGGCAATAGCAGGACTCAACCATATCCGCTCATGGACTTCAGAGAGCTTGCCATCTGCAGTTTCTGTTGCTGCCATTGCTTGGTCTCTTACACTTCTTGCCATGGGCTTTGCATGCAAAGAGATTGAGCTTAACATCAGAAATGCCCGTTTGAGAACAATGGAGGCTTTTCTTATCATCCTTTCAGCTACACAGCTTTTCTACATAGCTGCTATTCATGGTGCTGCTGCTTATAGAAGATAA 483 0.4306 MANEQLKPVATLLLGLNFCMYVIVLGIGAWAVNRAIDHGFVIGAGFDLPAHFSPIYFPMGNAATGFFVTFALIAGVVGAGSAIAGLNHIRSWTSESLPSAVSVAAIAWSLTLLAMGFACKEIELNIRNARLRTMEAFLIILSATQLFYIAAIHGAAAYRR 160
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal4g1427 160 Pfam AWPM-19-like family 16 155 IPR008390 -
Lal4g1427 160 PANTHER AWPM-19-LIKE FAMILY PROTEIN 1 160 IPR008390 -
Lal4g1427 160 PANTHER ABA INDUCED PLASMA MEMBRANE PROTEIN 1 160 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal4g1427 Lal-Chr4 18454021 18456096 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal4g1427 1 154 Miscellaneous Gene Families AT5G46530 75.974 1.17e-85 246
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal4g1427 - - gmx:100527291 287.73
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal21g1149 21 14117250 14119281 Lal4g1427 4 18454021 18456096 LSH