Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal4g1410 ATGGTGAAATTGAAGATCGCAGGTTTATGGGTTGGTGTTATTGAAAACGTTGAACTCGAAAATTGGACCATACCCATGTTGAAGGAAGAGATTGCAAATCGATCAAATTGCACTTCTGATTCCATCAAACTCATATGTAGTGGCAAGGTTTTGAAGGAAGACACAGTTGATAATGATGGCAAAGTTCAAAACTTGATCCAATTGGGTATAAAAAACAACTCTAAGATACTCGCTAATCGTGTTACTTCTCCTCAAGAAGGAATTTCTCTTAAACAACACATGATTGCTGAAGAAGAACGCTCTACAAGGCTTTCTCGTCTTAAGACAGCTGTGACTGCACTGGCTGAAAGGCATGCAGATGGTTCATTACCTATTGAAGACTTCAGCATAGAAGTTGAAGATCAAAATGGACAAAAAGTACGTTTAGGTTCTGAGACTGATCAGAGGGCTGTAATGATGGGACTAATGCTTCTTGCAAAGGGGAAGCGCCTTATTAGACAGGGAAATTATAAAGATTCGCTAGAAGTGCTTAGCATGGGAGAGGAGGCATTCTCTCTTTGCGATCCGAAAGTCCTCGAGCTTGTTGACAATGTTCCAATACTGCAAATAGACATTGTGTGGTGCTACTTTATGATACGAGACATTAGATGGCTCTCAGATGCAGGAAAGCGTCTTGAAATAGCGAGAGCAGGAATCGAGCGTGCTCATGGGAAGGATTTTCTCCGCCTCAGGCTCTTACAAGGAGGTCGCTATCCCGAACTTGCAGTGCATTTGAGACTTGAGCTGCTAGAAGGTGTTGTGGCATATCACAGTGGCCAATTAGAGAAATCAAGAAAAGCATTAGCTTCTGCAAAAGCAAAATTTGTCAAGCTGCAGGTGTCCGATGAGGCCTTATCACTTGTTATGAGCATGGGATTTGGAGAACGTGAAGCAAAGAGAGCATTGCGAATGAACAATCAAGACGTGGCGAGTGCCATTGATTTCCTTGTTGAGGAGAGGACTAAGAAAAGGCAAAAACAGGAGGAAGATATCCGGAGAAGAGATGAAATTAAGGAGCAAAAACGGTATGGGATGACACCCTCAAAGAAAGCTGTGGATATCGAGAGATTAAATGAATTGGTCTCGATTGGGTTTGACAAGGAGCTTGCTGCTGAAGCCCTTCGAAGAAATGAAAATGATACCCAGCAGGCATTGGATGATTTGACAAATCCAGAGACTAGTTCTGCTATACAGGTTCATATCGAGTCAAGGAAAAGGAAGAGGAAGGAACAAGCTAGAAATTCTGCAATTGAAAAAGTCGTAGGCATGGGTTTTGAAAGATCAAAAGTGGTTGCTGCTTTTCAGACTGGTGGCTCTTTAGAAACAGTGTTGCAAATACTGACGGAACAACCAGAGGCTGACCTTGCACCAGCCGCCGATAACATGCAACCTGCAGTAAATTCAACTACTGCTCCTCAAGACGGTGCAAGTTCATCTGCTACTTTACCGGACAATGTTAGTGCCGATATTCCAGACCTAATGCACAATGTTGAAGGGAGAGATGTAGAGATGGAAGAGGAGCTTTCAGAAGATATAGCAAATGCAGATGCTCTAGATGACTATGACATTGAAGTTAACATAGAAGGGGAAGCCATAACCGAGTACCTGAATCTGGTTGATTCAGCAAGCAGCTGTGGGAAAATGGTTCTTTCCCAGTAA 1698 0.4282 MVKLKIAGLWVGVIENVELENWTIPMLKEEIANRSNCTSDSIKLICSGKVLKEDTVDNDGKVQNLIQLGIKNNSKILANRVTSPQEGISLKQHMIAEEERSTRLSRLKTAVTALAERHADGSLPIEDFSIEVEDQNGQKVRLGSETDQRAVMMGLMLLAKGKRLIRQGNYKDSLEVLSMGEEAFSLCDPKVLELVDNVPILQIDIVWCYFMIRDIRWLSDAGKRLEIARAGIERAHGKDFLRLRLLQGGRYPELAVHLRLELLEGVVAYHSGQLEKSRKALASAKAKFVKLQVSDEALSLVMSMGFGEREAKRALRMNNQDVASAIDFLVEERTKKRQKQEEDIRRRDEIKEQKRYGMTPSKKAVDIERLNELVSIGFDKELAAEALRRNENDTQQALDDLTNPETSSAIQVHIESRKRKRKEQARNSAIEKVVGMGFERSKVVAAFQTGGSLETVLQILTEQPEADLAPAADNMQPAVNSTTAPQDGASSSATLPDNVSADIPDLMHNVEGRDVEMEEELSEDIANADALDDYDIEVNIEGEAITEYLNLVDSASSCGKMVLSQ 565
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal4g1410 565 MobiDBLite consensus disorder prediction 476 498 - -
Lal4g1410 565 SUPERFAMILY Ubiquitin-like 20 77 IPR029071 -
Lal4g1410 565 ProSiteProfiles Ubiquitin-associated domain (UBA) profile. 292 332 IPR015940 -
Lal4g1410 565 SUPERFAMILY UBA-like 363 404 IPR009060 GO:0005515
Lal4g1410 565 ProSiteProfiles Ubiquitin-associated domain (UBA) profile. 420 463 IPR015940 -
Lal4g1410 565 MobiDBLite consensus disorder prediction 476 501 - -
Lal4g1410 565 Gene3D - 367 404 - -
Lal4g1410 565 Gene3D - 294 333 - -
Lal4g1410 565 Gene3D - 13 84 - -
Lal4g1410 565 SUPERFAMILY UBA-like 286 333 IPR009060 GO:0005515
Lal4g1410 565 CDD UBA1_NUB1_like 294 329 - -
Lal4g1410 565 CDD UBA 370 399 - -
Lal4g1410 565 ProSiteProfiles Ubiquitin domain profile. 23 76 IPR000626 GO:0005515
Lal4g1410 565 Pfam UBA/TS-N domain 295 329 IPR015940 -
Lal4g1410 565 PANTHER NEDD8 ULTIMATE BUSTER-1 BS4 PROTEIN 21 555 IPR039749 -
Lal4g1410 565 ProSiteProfiles Ubiquitin-associated domain (UBA) profile. 364 404 IPR015940 -
Lal4g1410 565 SMART uba_6 366 403 IPR015940 -
Lal4g1410 565 SMART uba_6 426 462 IPR015940 -
Lal4g1410 565 SMART uba_6 294 331 IPR015940 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal4g1410 - - gmx:100804062 771.155
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal4g1410 4 18315212 18320147 Lal4g1410 4 18315212 18320147 ECH