Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal4g1281 ATGGTCTCTCCGAAGCAGCTTCTATCCACACTCGAATCAGCGCTTCTCGGACCTTCTCCTCCGACGGCGGCGCAACGCGTCGAACTCTTGCACGCTATTCGCAATTCTTTCCGTTCATTCCAATCCCTTCTATCCTATCTGCCTCCAAAGTCCTCCGATCGAAGTCAAGTTCAGTCAAAATCAGTTAGGCTTCCAGATTCTTCGCCTATCTCTCTTGATGATCAGGATGTCCAAATTGCACTCAAATTGAGTGATGACCTCCATCTCAATGAAGTAGATTGCGTTCGCTTGCTTGTATCTGCTAATCAAGAGTGGGGCTTAATGGGAAGGGAACCTCTGGAAATTCTACGGCTTGCAGCTGGGCTCTGGTATACAGAGAGAAGAGATCTGATAACATCCCTCCATTTGCTGTTAAGGGCTGTGGTGCTTGATCAGGGTCTTGAAGATGAAATATTAGTTGACATTCAGAAATATCTGGAAGATCTTATCAATTCTGGACTACGACAGCGGTTGATTTCTCTTATCAAGGAACTCAATAGAGAAGAGCCTTCTGGTTTGGGTGGTCCTCAGTGTGAGCATTATGTTCTTGATTCAAGAGGTTCTCTTGTGGAGCGGCAGGCAGTGGTCTCTAGAGAACGACTTATTATAGGACATTGCCTTGTCCTTTCAGTCCTGGTTGTTCGGACAAGTCCAAAGGACATGAAGGATATTTTTTCTGTTTTAAAAGATTGTGCGTCCGAAGTTAGTGAGAACAATACGACTGTAAAACATCAGATTACCTTCAGTCTTCTTTTCGCTCTTGTGGTTGCTTTTGTTTCAGATGGTTTGAGCACAGTGCCGGATAAAGCGTCTGTCCTTTCTTCTAATGCTTCATTCAGACATGAATTTCATGAACTTGTAATGGCCACTGGTAATGATCCAGTTATTGAAGGCTTCGTTGGCAGCATCAGACTTGCTTGGGTGGTACATTTGATGTTAATACAAGATGGTGTTGCATCAAGGGAGACTGTTTCAAGTGGTTCATCAAATGAAATGGGTTATCTTAGTCAATACTTGGAAGTCATTTTCTCAACTAATGTTTTTCAGTTTTTACTTGACAAAATTCTTCATACTGCTGCCTACCAGAATGAAGATGAAGATATGATCTATATGTATAATGCTTATCTTCACAAGCTGATTACCTGCTTCTTGTCTAATTCACTCGCGAGAGACAAGATCAAGGAATCAAAGGAGAGGACAATGAGTGTGCTTAGTCCATACCGAGTTGTTGGATCACAGGACAGTTCTCAACATTGTTCTGAAATTGGCACTTTAACTTTTAATTCAATCTTGGACTTCGTGAGCGAAATTTATCAGAAAGAACCTGAGCTCTTATCTGGAAATGATGTGATATGGACGTTTGTAAATTTTGCTGGAGAAGACCATACAAATTTCCAAACACTTGTTGCTTTCTTAAATATGCTGAGCACCTTGGCTTCTAGTCAAGAAGGTGCTTCTAAGGTTTATGATTTGCTGCAAGGTAAAGCATTCCGCTCAATTGGGTGGAGCACTTTGTTTGAATGCTTAGCAATTTATGATGAGAAATTCAAACAGACTCTTCAAACTGCTGGAGTGATGTTGCCTGAAATTCAGGAGGGGGATGCAAAAGCACTTGTGGCATACTTAAATGTTCTAAAGAAGGTTGTGGAAAATGGGAACCCAATAGAAAGGAAAAACTGGTTTCCTGATATTGAACCACTGTTCAAGCTTCTTAGTTATGAAAACGTACCCCCATATCTTAAGGGTGCTCTAAGGAGTGCAATAGCCACATTCATTCGTGTCTCTCCAGTATTGAAGGATAGCATTTGGACCTATCTTGAACAATATGATCTGCCAGTTGTTGGGCCTGATGTCCAGAACAGTCAACAACCCATGGCTACTCAGGTTTATGATATGCAATTTGAATTAAACGAAATTGAAGCAAGGAGAGAGCAATATCCTTCAACTATATCATTCCTTAATTTGATAAATGCTCTTATTGCAGAAGAAAGAGATTTGAGTGATAGAGGGCAACGATTTATTGGCATCTTTAGGTTCATCTATGATCATGTTTTTGGGCCATTTCCTCAAAGAGCTTATGCAGATCCGTGTGAAAAGTGGCAGTTAGTTGGTGCTTGCCTTCAACATTTTCACATGATGCTAAACATGTATGATGTCAAGGATGAAGATTTTGAGGGTGTAGGTGATCAGTCACTACTTTCAACAACTAAGGGGTCATCACTTCAGACGCAGCTTCCTGTTTTAGAATTGCTTAAAGATTTCATGAGTGGTAAGACTGCCTTTCGCAACATAATGGGTATTCTTCTGCCAGGAGTGAATTCTACCATTTCTGAACGCAATAGTCAAATATATGGGCAGCTTTTGGAGAATGCAGTTCAGCTTTCTCTGGAAATTATAATACTAGTGCTTGAAAAAGATTTGCTTCTTTCTGATTACTGGCGTCCGCTATACCAGCCATTGGATATTATACTCTCCCATGATCACAATCAAATAGTGGCTTTGTTGGACTCTCGCATGGTTGGGCTCGTTCAGCTATTGCTAAAATCTAATGCTGCAAACAGCTTGATAGAAGATTATGCAGCCTGCCTTGAGTTGCGGTCAGGAGAGTCTACTGTTGAAAATAATACTGATGATCCAGGCATTCTTATCATGCAACTTTTAATTGACAACATCAGCAGGCCAGCTCCAAATATCACTCATTTACTACTTAAATTTGATCTAGACATGCCTGTTGAGAGGACAGTTTTACAGCCCAAGTTTTATTACAGTTGCATGAAGGTTATTCTTGATATGCTGGAGAACCTTTTAAAGCCTGATGTAAATGCATTACTTCATGAATTTGGTTTTCAGCTCCTTTATGAGTTATGTGTAGATCCACTAACATGTGAACCAACAATGGATCTGTTGTCAAATAAAAAGTACCATTTCTTTGTTAAGCACCTTGATGCAATTGGTATTGCTCCGCTTCCTAAACGGAATAGTAACCAGCCACTCCGTATCAGTTCTCTTCATCAGAGAGCTTGGCTCCTTAAACTTTTAGCTGTTGAACTACATGCTGGTGACGTTAGTAGCTCCACACATAGAGAAGCATGTCAAACAATCCTTTCTCATCTTTTTGGGCAAGATATCCTTAAAACTGGTGGTGGCCAGGCCATGTCTCTATTTTCGCTTCATGCTACTTATGAAAATGCTGCTATAAGAACTGTCAGTAAGAATAAGGTATTAGAATTGCTTGAAATCATTCAGTTTAGATGTCCAGATACCTCTACTAAGCTCTCAAATATTGTGGCTGGTATGAAGTATGACTTGCTGGCAGAAGACATACTTGGAAATTCTGGAAAGGGTGGTGTCTACTATTATTCTGAGAGAAATGACCGTCTAATTGATCTTGTTTCCTTCCATGACAAACTTTGGCAGAAATATAATCCTGCATATATCCAGGTTAGTAACCTGGGCAGTGAAGTTGAGCTAAATGATGTGCGGGAGACAATTCAGCAGTTGCTGAGATGGGGTTGGAAATACAATAAAAATCTTGAGGAACAAGCAGCACAGCTACATATGGTTACTGCCTGGGTCCTTGATGCATCTCTTAGTTCTTGTGCGTCTCCAGACTGTTCATTGAGAATGGCATTCATATTATCACAGGTCGCATTGACATGCATGGCTAAACTACGAGATGAAAGGTTTTTGTTCCCTGGCAGTCTGAATTCTGATAATATCACGTGCCTTGATCTCATTGTGGTGAAGCAATTATCGAATGGTGCTTGTCTGACCATATTGTTTAAGCTTATTATGGCAATTTTAAGAAATGAATCATCAGAAGCTCTTCGGAGACGTCAATATGCCTTGCTTCTTAGCTATTTCCAGTATTGTCAAAATGTGGTTGATCCAGATGTTCCAACCACAGTTCTTCAATTCTTGCTGCTCAGTGAACAAGATAATGAATATATTGATCTACCAAAGATCGACAAAGATCAAGCAGAACTGGCTCTTGCAAATTTTTCTACTTTAAGGAAAGAGGCTCAGAGCATCTTGGATTTGGTCTTAAAAGATGCAACCCGTGGCAGTGAACCGGGAAAGACGATATCACTCTATGTTCTTGATGCATTGATTTGTATAGATCAAGAGCGATATTTCCTGAACCAGCTTCAAAGCAGGGGCTTTTTAAGGTCATGCTTTACAGCCATAAGCAGTGTTTTGAATCAGGATGGTGGTCTTTCACTGGACTCATTGCAGAGGGCATGTACCTTTGAGGCTGAACTTGGTTTATTACTAAGAATAAGTCACAAATATGGGAAATCAGGAGCACAGGTACTATTTTCTATGGGTATACTGGAGCATCTTTCTTCTGGAAGGGTAATCAATTTACAGGGAGGTTTAAGGAGGGCTGAGACAAGACTTAGAAGAGATATGGCTGTTGATGTTGATAGACAACGAATGATTGTAACTCCTATTCTGAGATTGGTCTTTTCATTAACTTCCTTGGTTGATACATCAGAGTTTCTAGAGGTGAAGAATAAAATTGTCCGTGAAGTAATTGATTTTGTCAAAGGGCATCAACCACTCTTTGATCATGTTCTCCGTGTAGACATTGCTGAAGCAGATGATTTAAGAATGGAACAGGGCAATTTAGTTGTTGGTATTCTCAGCAAGATTTGGCCATATGAAGAAAGCGATGAGTATGGTTTTGTTCAAGGGCTTTTTGGCATGATGCGTGCTCTTTTCTCTCGTGACTTGAAGGTTCCTAGTTTTGCTCAATCAATATCACCTGAGAATCAAAGGAATTCAGAACTACAGATCTTTAAGTTATGCTTCAGTCTGAGCTCTTACTTATATTTTCTAGTCACAAAGAAATCTCTGAGATTGCAGCATTCAAATGCCTCTTCCAGCTATCCTACTTCCATTGAACTCCAGCAACCAACATTGACCTTGCTTAATTCTCTTCTTACTTCGGTTACAACTGCACTAGAAAGGGCTGCTGAGGAGAAATCATTGCTACTGAATAAGATTCGAGACATAAATGAATTGTCAAGGCAAGAGGTGGATGAAATCATCAATATGTGTGTGCAGCAAGACTCTATTCCATCTTCAGACAACATACATAAGAGGCGATACGTTGCAATGGTAGAAATGTGTCGAGTTGTTGCTAGTAGGGATCAGCTAATCATTTTGTTGCTCCCACTCTCCGAACATGTACTGAATATCATCCTCATCCATCTTGAAGAAAGCTCTGTTGCCTCTGATTCTACCTTGACCACAAAAACAATTACATATGGTCCAAAGTATGATCCTAAGCAGGATATTGCATCGTTATGTGAGAAGTTAGTTCCAACTCTTGAACGACTCGAGCTACTGAGTGAGGAGAAAGTTGGGCACAATCTCAAAGTATTCCACAGATTAGCAACTTCTGCAAAAGAGATAGCAATTCAAAAGTTGGCTTTGTAG 5484 0.4028 MVSPKQLLSTLESALLGPSPPTAAQRVELLHAIRNSFRSFQSLLSYLPPKSSDRSQVQSKSVRLPDSSPISLDDQDVQIALKLSDDLHLNEVDCVRLLVSANQEWGLMGREPLEILRLAAGLWYTERRDLITSLHLLLRAVVLDQGLEDEILVDIQKYLEDLINSGLRQRLISLIKELNREEPSGLGGPQCEHYVLDSRGSLVERQAVVSRERLIIGHCLVLSVLVVRTSPKDMKDIFSVLKDCASEVSENNTTVKHQITFSLLFALVVAFVSDGLSTVPDKASVLSSNASFRHEFHELVMATGNDPVIEGFVGSIRLAWVVHLMLIQDGVASRETVSSGSSNEMGYLSQYLEVIFSTNVFQFLLDKILHTAAYQNEDEDMIYMYNAYLHKLITCFLSNSLARDKIKESKERTMSVLSPYRVVGSQDSSQHCSEIGTLTFNSILDFVSEIYQKEPELLSGNDVIWTFVNFAGEDHTNFQTLVAFLNMLSTLASSQEGASKVYDLLQGKAFRSIGWSTLFECLAIYDEKFKQTLQTAGVMLPEIQEGDAKALVAYLNVLKKVVENGNPIERKNWFPDIEPLFKLLSYENVPPYLKGALRSAIATFIRVSPVLKDSIWTYLEQYDLPVVGPDVQNSQQPMATQVYDMQFELNEIEARREQYPSTISFLNLINALIAEERDLSDRGQRFIGIFRFIYDHVFGPFPQRAYADPCEKWQLVGACLQHFHMMLNMYDVKDEDFEGVGDQSLLSTTKGSSLQTQLPVLELLKDFMSGKTAFRNIMGILLPGVNSTISERNSQIYGQLLENAVQLSLEIIILVLEKDLLLSDYWRPLYQPLDIILSHDHNQIVALLDSRMVGLVQLLLKSNAANSLIEDYAACLELRSGESTVENNTDDPGILIMQLLIDNISRPAPNITHLLLKFDLDMPVERTVLQPKFYYSCMKVILDMLENLLKPDVNALLHEFGFQLLYELCVDPLTCEPTMDLLSNKKYHFFVKHLDAIGIAPLPKRNSNQPLRISSLHQRAWLLKLLAVELHAGDVSSSTHREACQTILSHLFGQDILKTGGGQAMSLFSLHATYENAAIRTVSKNKVLELLEIIQFRCPDTSTKLSNIVAGMKYDLLAEDILGNSGKGGVYYYSERNDRLIDLVSFHDKLWQKYNPAYIQVSNLGSEVELNDVRETIQQLLRWGWKYNKNLEEQAAQLHMVTAWVLDASLSSCASPDCSLRMAFILSQVALTCMAKLRDERFLFPGSLNSDNITCLDLIVVKQLSNGACLTILFKLIMAILRNESSEALRRRQYALLLSYFQYCQNVVDPDVPTTVLQFLLLSEQDNEYIDLPKIDKDQAELALANFSTLRKEAQSILDLVLKDATRGSEPGKTISLYVLDALICIDQERYFLNQLQSRGFLRSCFTAISSVLNQDGGLSLDSLQRACTFEAELGLLLRISHKYGKSGAQVLFSMGILEHLSSGRVINLQGGLRRAETRLRRDMAVDVDRQRMIVTPILRLVFSLTSLVDTSEFLEVKNKIVREVIDFVKGHQPLFDHVLRVDIAEADDLRMEQGNLVVGILSKIWPYEESDEYGFVQGLFGMMRALFSRDLKVPSFAQSISPENQRNSELQIFKLCFSLSSYLYFLVTKKSLRLQHSNASSSYPTSIELQQPTLTLLNSLLTSVTTALERAAEEKSLLLNKIRDINELSRQEVDEIINMCVQQDSIPSSDNIHKRRYVAMVEMCRVVASRDQLIILLLPLSEHVLNIILIHLEESSVASDSTLTTKTITYGPKYDPKQDIASLCEKLVPTLERLELLSEEKVGHNLKVFHRLATSAKEIAIQKLAL 1827
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal4g1281 1827 PANTHER NUCLEAR PORE COMPLEX PROTEIN NUP205 9 1634 - -
Lal4g1281 1827 Coils Coil 1669 1689 - -
Lal4g1281 1827 Pfam Nuclear pore complex scaffold, nucleoporins 186/192/205 855 1550 IPR021827 GO:0005643
Lal4g1281 1827 Pfam Nuclear pore complex scaffold, nucleoporins 186/192/205 27 830 IPR021827 GO:0005643
Lal4g1281 1827 PANTHER NUCLEAR PORE COMPLEX PROTEIN NUP205 9 1634 IPR021827 GO:0005643
Lal4g1281 1827 MobiDBLite consensus disorder prediction 49 68 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal4g1281 Lal-Chr4 16825688 16878598 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal4g1281 K14310 - gmx:100777616 3093.91
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal4g1281 4 16825688 16878598 Lal4g1281 4 16825688 16878598 ECH