Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal4g1231 ATGGGTTTGAAATCGCTAAGCTCAATCAGTGTTTCCGATATTGAATCCCTTGGAATTTCGCGAGAAGCCGCTACGTCTCTCCACGAACGTGTCTCAGAAATCATTAACACTCATGGAGATTGTTCTCCTTCCACGTGGCAGAATATCACAAGAAGTATCCTTAATCCTGAACTCCCTTTTTCTTTCCATCAGATGTTGTATTACAGTTGCTACAAGGATTACGGTCCTGACCCACCTGCTTGGATACCCGACCTGGAAAATGCTGCTTTGACAAATGTTGGCCTGTTACTGGAGAGGAGGGGTAAAGAGTTTCTGGGTTCAGGATATAAGGATCCAATAACAAGCTTTTCCGATTTCCAAAAATTCTCAGTCTCAAACCCTGAGGTTTACTGGAAAACTGTGTTGGAGGAAATGAATATTTCATTTTCCAAACCACCTCAATGCGTCTTACATGAGAGTCTCCCGGGGGGAAGCCAATTATCTTATCCAGGTGGTCAGTGGCTTCCCGGAGCATATATTAATCCAGCAAAGAATTGCTTGAATTTAAATTCCAAAAGAAGTTTGAATGATACCGTAATAATATGGCGTGATGAACTGCATGACAGTCTCCCTGTGCAAAGGATGACTTTGAAGGAATTGCGCGAAGAGGTTAGTTGCATATGCTCTCGAAGCACTGGATCTGGTTATGTTGTTGTATCTATTGCTGATAGTTTTGCACCGCTCGAAATATCAACTAGGCTTAAAATATCAAATGCAAAAGTCATATTTACTCAGGATCTCATAATTCGTGGTGACAAAAGCCTCCCCCTGTACAGTCGAGTCGTGGATGCCCAGTCACCTATGGCTATAGTTATCCCTACAAAAGGCTCTGAGTTTAGCATGAAACTACGCGATGGTGACCTTTCTTGGCATGATTTTCTGGAGGGAGTCAATAATCTAAGAGGGAAGGAATTCATAGCTGTGGAAAAACCAGTAGAAGCGTTTACCAACATTCTCTTTTCTTCTGGAACAACAGGTGATCCAAAGGCAATTCCATGGAGCAATATTTCTCCCCTGAAAGCTGCTGCAGATGCATGGTGCCACTTGGACATTCGTAGAGGTGATATTGTTTCCTGGCCTACTAACCTTGGATGGATGATGGGTCCATGGCTAGTATATGCATCATTCATAAATGGAGCTTCAATGGCTTTGTATAATGGATCCCCTCTTGGGTCTGGCTTTGCCAAGTTTGTACAGGATGCTAAAGTAACAATGCTTGGTGTAATTCCAAGTCTTGTCCGAAGTTGGAGAAATGCAAATTCCACATCTGGGTATGATTGGTCAGCTATTCGTTGCTTTGGCTCCACTGGAGAAGCATCTAATGTAGATGAATACCTTTGGCTGATGAGGAGAGCTAACTACAAGCCTATCATTGAATATTGTGGTGGTACAGAGATTGGAGGTGGATTTGTTACCGGATCATTACTACAGGCTCAGTCATTGGCGGCTTTCAGCACTCCTGCTATGTGCTGCACTTTACATATTCTTGATGATGATGGCCATCCTATTCCAGAAAATTCTCCTGGAATAGGTGAATTGGCTCTTGGTCCCCACATGTTTGGAGCGTCAAATACACTGCTGAATGCTGACCACTATAGTGTCTACTTTAAGGGAATGCCTCTCTGGAACGGAAGGGTTTTACGGAGACATGGAGATGTATTTGAGCGTACTGCTAGAGGATACTATCATGCACATGGTCGTGCAGATGATACAATGAACCTTGGAGGGATCAAGGTAAGTTCAGTCGAGATTGAACGCATCTGCAGTGGAGTAGATAGCAATATCCTGGAACTAGCTGCAATAGGGGTACCACCTTCTGGAGGTGGGCCTGAGGTGCTGGTTGTGGCTGTTGTGTTGAAGTGTTCAGACACAGAAGATTTACAACAATTGAGGATTTCTTTCAATTCAGCTCTCCAAAAGAAACTAAATCCATTATTCAGGGTTTCTCGAGTTGTGTCACTTCCATCTCTTCCAAGGACAGCATCCAACAAGGTGATGAGAAGGGTTTTACGGCACCAACTTTTACATAACGGAAGTTCTAAAATATAA 2088 0.433 MGLKSLSSISVSDIESLGISREAATSLHERVSEIINTHGDCSPSTWQNITRSILNPELPFSFHQMLYYSCYKDYGPDPPAWIPDLENAALTNVGLLLERRGKEFLGSGYKDPITSFSDFQKFSVSNPEVYWKTVLEEMNISFSKPPQCVLHESLPGGSQLSYPGGQWLPGAYINPAKNCLNLNSKRSLNDTVIIWRDELHDSLPVQRMTLKELREEVSCICSRSTGSGYVVVSIADSFAPLEISTRLKISNAKVIFTQDLIIRGDKSLPLYSRVVDAQSPMAIVIPTKGSEFSMKLRDGDLSWHDFLEGVNNLRGKEFIAVEKPVEAFTNILFSSGTTGDPKAIPWSNISPLKAAADAWCHLDIRRGDIVSWPTNLGWMMGPWLVYASFINGASMALYNGSPLGSGFAKFVQDAKVTMLGVIPSLVRSWRNANSTSGYDWSAIRCFGSTGEASNVDEYLWLMRRANYKPIIEYCGGTEIGGGFVTGSLLQAQSLAAFSTPAMCCTLHILDDDGHPIPENSPGIGELALGPHMFGASNTLLNADHYSVYFKGMPLWNGRVLRRHGDVFERTARGYYHAHGRADDTMNLGGIKVSSVEIERICSGVDSNILELAAIGVPPSGGGPEVLVVAVVLKCSDTEDLQQLRISFNSALQKKLNPLFRVSRVVSLPSLPRTASNKVMRRVLRHQLLHNGSSKI 695
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal4g1231 695 Gene3D - 583 694 IPR045851 -
Lal4g1231 695 Pfam AMP-binding enzyme 228 587 IPR000873 -
Lal4g1231 695 PANTHER ACYL-ACTIVATING ENZYME 17, PEROXISOMAL-RELATED 227 689 - -
Lal4g1231 695 PANTHER ACYL-ACTIVATING ENZYME 17, PEROXISOMAL-RELATED 3 220 - -
Lal4g1231 695 PANTHER ACYL-ACTIVATING ENZYME 17, PEROXISOMAL-RELATED 227 689 - -
Lal4g1231 695 PANTHER ACYL-ACTIVATING ENZYME 17, PEROXISOMAL-RELATED 3 220 - -
Lal4g1231 695 SUPERFAMILY Acetyl-CoA synthetase-like 118 687 - -
Lal4g1231 695 ProSitePatterns Putative AMP-binding domain signature. 331 342 IPR020845 -
Lal4g1231 695 Gene3D - 107 582 IPR042099 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal4g1231 Lal-Chr4 16213781 16225819 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal4g1231 1 561 Acyl Lipid Metabolism Gene Families AT5G23050 64.915 0.0 766
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal4g1231 - - gmx:100779628 1127.46
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal4g1231 4 16213781 16225819 Lal4g1231 4 16213781 16225819 ECH