Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal4g1114 ATGATGCCGGGAATGATTACAAATGGGGTTCGTGACGTCGAGGGAGATAATGAGATGAACGGGAATCATTCCCCTTCTAAGGAAAAATCGACTCCGATCAAGTCTCCGAGGAGTTCATTGAGTCCTCAAAGATGCGAAAGCGCTGTCCCGAATTCCGTGAATGATGGGGCGGTTGAGGCGTCAATTGAGCAGCTCTATGAAAATGTATGTGACATGCAGAGTTCTGATCAGTCACCCTCGAGGCTAAGCTTTGGAACCGATGGTGATGAGTCTAGAATTGATTCGGAATTGCATCATCTGGTTGGAGGACGGATGACTGAGGTGGAGATAATGTTAGAGGAAGTGGAAGTGGAAAAGGGGCCAGGTGGGAATTCTGGTAGTGAAACATCCTCTAGAACTTGTAGTTTATCCAAGGATAAGAAGTTGGATAGGGTGGTTGAAATTACGTCTGCAACAGCAAGTTCCAATTCTTTGGAAAAACAAGTCGAAGTGTCAAATTCGCTACTGGGCAAAACTTCACGAAAATCAAAACCCATAGGAAAAGGCCTTCTTGCAAAACCTCATGTAGAGAGAAAGAATGATAAGCCTTTGGTAAAACAAATTAGTAGTGTTACTGGCGTGAAGAAATCAAAGAATTCTCCTTTGAGAAAGACAGTGTCACATATCCAAGTTGAGAATTCAGCTGAATCAACATTAGATAAACCAGAGCGTGCATCGATATTACTGAAGCAGGCAAGAGATATGATTTCATCCGGAGATAATCCGCAGAAAGCTCTTGAATTAGCTCTTCAAGCAAAGGAACTGTTTGAGAAGTTTGGTAATGGGAAACCAGGTTTGGAGCTGGTTATGTGTTTACATGTGACGGCAGCAATATATTGCAACTTGGTTCGATACACGGAGGCAATTCCAATTCTTGAGCGCTCAATTGAGATTCCTGTTATGGAGGAAGGTCAACAGCATGCGCTTGCTAAATTTGCTGGTCACATGCAACTCGGCGACACATATGCTATGTTGGGCCAGCTTGAGAACTCAATTATGTGCTACACCACAGGGTTTGCAGTCCAGAGGCAGGTTTTAGGAGAAACAGACCCAAGAGTTGGTGAAACTTGTCGGTACGTTGCTGAAGCTAATGTTCAAGCATTGCAATTTGATGAAGCAGAGAAGCTCTGTCAAATGGCTCTTGACATTCATAAAGCAAATAGTTCAGCCCCATCACTTGAAGAAGCAGCTGATAGGAGGCTCATGGGCCTTATATGTGAAACAAAGGGAAATCATGAAGCCGCTCTTGAGCATCTTGTTTTAGCCAGCATCGCAATGGTGGAAAATGGCCAGGAAGTGGAAGTGGCGTCTGTTGATTGTAGCATTGGAGACACATACCTATCCTTGTCTCGATACGATGAAGCCATTTTTGCATACCAGAAAGCGCTAACATTTTTCAAGACCAGCAAAGGGGAGAATCATCCAGCAGTGGGATCTGTCTTTGTCCGTATGGCTGACTTATATAATAGGTCGGGGCAATTAAAGGAATCTAAATCATATTGTGAGAATGCACTTAAAATATACGAGAATCCCATGCCCGGAGTTCCTCTTGAGGATATTGCTAGTGGTCTTTCGAATGTTTCAACTATCTATGTGTCAATGGATGAGCTTGAACAAGCACTCAAGTTGCTGCATAAATCACTAGAGATATATAATAATGCCCCAGGTCAACAAAGCACAATAGCAGGGATTGAAGCTCAGATCGGGGTCATGCATTACATGTTGGGAAACTATACTGAATCTTACAATACTCTGAAGAATTCTATCACAAAGCTTCGTGCTATTGGAGAGAAGAAATCAGCCTTCTTTGGTGTTGCTCTTAATCAACTAGGACTTTCCTGCGTGCAGCGTTACGCCTTAAGTGAGGCTACAGAATTATTTGAAGAAGCAAAGAGTATTTTGGAACTTGAATATGGACCATATCACCCCGAAACACTCGGGGTGTATAGCAACCTTGCTGGCACATATGATGCAATGGGCAGGCTGGATGATGCAATTCAGATTCTAGAGTTTGTTGTTGTTATGAGGGAGGAAAAGCTTGGGACAGCAAATCCTGATGTGGATGATGAGAAAAGAAGGTTAGGTGAGTTGTTGAAGGAAGCTGGAAGAGTTCGTAGCCGAAAAGCTAGGTCACTCGAGAACCTTCTTGATGCCAACACTCTTCCTGTAAACAATCTTGTCACCAATGCCTGA 2232 0.4332 MMPGMITNGVRDVEGDNEMNGNHSPSKEKSTPIKSPRSSLSPQRCESAVPNSVNDGAVEASIEQLYENVCDMQSSDQSPSRLSFGTDGDESRIDSELHHLVGGRMTEVEIMLEEVEVEKGPGGNSGSETSSRTCSLSKDKKLDRVVEITSATASSNSLEKQVEVSNSLLGKTSRKSKPIGKGLLAKPHVERKNDKPLVKQISSVTGVKKSKNSPLRKTVSHIQVENSAESTLDKPERASILLKQARDMISSGDNPQKALELALQAKELFEKFGNGKPGLELVMCLHVTAAIYCNLVRYTEAIPILERSIEIPVMEEGQQHALAKFAGHMQLGDTYAMLGQLENSIMCYTTGFAVQRQVLGETDPRVGETCRYVAEANVQALQFDEAEKLCQMALDIHKANSSAPSLEEAADRRLMGLICETKGNHEAALEHLVLASIAMVENGQEVEVASVDCSIGDTYLSLSRYDEAIFAYQKALTFFKTSKGENHPAVGSVFVRMADLYNRSGQLKESKSYCENALKIYENPMPGVPLEDIASGLSNVSTIYVSMDELEQALKLLHKSLEIYNNAPGQQSTIAGIEAQIGVMHYMLGNYTESYNTLKNSITKLRAIGEKKSAFFGVALNQLGLSCVQRYALSEATELFEEAKSILELEYGPYHPETLGVYSNLAGTYDAMGRLDDAIQILEFVVVMREEKLGTANPDVDDEKRRLGELLKEAGRVRSRKARSLENLLDANTLPVNNLVTNA 743
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal4g1114 743 MobiDBLite consensus disorder prediction 24 50 - -
Lal4g1114 743 Pfam Tetratricopeptide repeat 619 683 - -
Lal4g1114 743 Pfam Tetratricopeptide repeat 448 523 - -
Lal4g1114 743 ProSiteProfiles TPR repeat profile. 534 567 IPR019734 GO:0005515
Lal4g1114 743 MobiDBLite consensus disorder prediction 117 136 - -
Lal4g1114 743 SMART tpr_5 325 358 IPR019734 GO:0005515
Lal4g1114 743 SMART tpr_5 409 442 IPR019734 GO:0005515
Lal4g1114 743 SMART tpr_5 617 650 IPR019734 GO:0005515
Lal4g1114 743 SMART tpr_5 491 524 IPR019734 GO:0005515
Lal4g1114 743 SMART tpr_5 367 400 IPR019734 GO:0005515
Lal4g1114 743 SMART tpr_5 534 567 IPR019734 GO:0005515
Lal4g1114 743 SMART tpr_5 449 482 IPR019734 GO:0005515
Lal4g1114 743 SMART tpr_5 575 608 IPR019734 GO:0005515
Lal4g1114 743 SMART tpr_5 659 692 IPR019734 GO:0005515
Lal4g1114 743 SUPERFAMILY TPR-like 368 526 IPR011990 GO:0005515
Lal4g1114 743 Gene3D Tetratricopeptide repeat domain 217 436 IPR011990 GO:0005515
Lal4g1114 743 SUPERFAMILY TPR-like 574 717 IPR011990 GO:0005515
Lal4g1114 743 PANTHER PROTEIN KINESIN LIGHT CHAIN-RELATED 3 2 732 - -
Lal4g1114 743 SUPERFAMILY TPR-like 253 402 IPR011990 GO:0005515
Lal4g1114 743 MobiDBLite consensus disorder prediction 1 51 - -
Lal4g1114 743 ProSiteProfiles TPR repeat profile. 449 482 IPR019734 GO:0005515
Lal4g1114 743 MobiDBLite consensus disorder prediction 71 85 - -
Lal4g1114 743 MobiDBLite consensus disorder prediction 71 90 - -
Lal4g1114 743 Gene3D Tetratricopeptide repeat domain 437 615 IPR011990 GO:0005515
Lal4g1114 743 PANTHER PROTEIN KINESIN LIGHT CHAIN-RELATED 3 2 732 - -
Lal4g1114 743 Coils Coil 547 567 - -
Lal4g1114 743 Gene3D Tetratricopeptide repeat domain 616 731 IPR011990 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal4g1114 Lal-Chr4 14406606 14410834 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal4g1114 - - mtr:MTR_3g077950 1093.18
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal4g1114 4 14406606 14410834 Lal4g1114 4 14406606 14410834 ECH
Lal7g0924 7 15666874 15678265 Lal4g1114 4 14406606 14410834 PCT
Lal4g1114 4 14406606 14410834 Lal7g0924 7 15666874 15678265 PCT