Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal4g0836 ATGATGAAAAGACGTTTCCTTTATTTATTGGAAAGCAAAACACCTCTTTCTCTCTCTCTCTCTCCTCTTTCTCTTCTCACATGTGTGAAATCAGCCATCCAGAAACAGAAGCACAAATCAAAACCTCGCTTGACATCATCTCTGCATTCTGTCATAAAAGATATGGGCACTGCAGAGGTTGTGTATTTATCTAGCGATGATGAAAGTGAAGAAGTTGGTCTGAAACCTGTTAAGTTGGAGCCAAATTTTGTTATAGATGCAAAGCAACAAAATAAGAACAACGAAAGCTCATTAGCCAGATCTCAGAGATCTCGAAGTCATCCCATTGGACATGATTCTGAAGAAAATACAAGCTCGAATGCTCCAAGTACAGGGCATAGTAATTCAAGTGTATTGGACCAGGGACTGTCGCCAGTTGATGATACAGGCATTTCTTATGCATCATCCATTTCTGCAGCACCCGTTTGTAGGCAGTTTTGGAAAGCCGGAAACTATGATGATGGGCTTGGTTCTAAAGTCACCGTACAAAATGCGAAAAACCATATGCATGTACACCCTATGTTCCTTCACTCAAATGCAACCTCACATAAGTGGGCATTTGGTGCCATAGCAGAGCTTCTTGATAATGCAATTGATGAGATCGAAAATGGGGCTACCTTCGTAATTGTAGATAAAACTTCAAATCTAAAGGATGGAAGTCCAACATTGTTGATTCAAGATGATGGTGGTGGAATGGATCCAGAAGCAATGCGCCATTGCATGAGTTTTGGATTTTCACAAAAGTCAAAATTTTCTATTGGAAAGTATGGAAATGGGTTCAAGACTAGTACTATGAGGCTTGGTGCAGACGTCATAGTCTTCAGTTGTCATCTAAATGATAGGATTATGACTCAAAGCATTGGACTTCTGTCATATACATTTTTGACACAAACACAACTTGATAGAATAGTAGTACCCATGGTGAATTATGAATATGATACATCAACTGGATCTTTGCAAATATTAAATGGCAGTGAGCATTTTGTGGCTAATTTATCCTTGCTGTTGCGTTTGTCACCATATTCATCAGAAGCAGAACTTCTTAAACAATTTGATGACATTGGATCTCACGGTACTAAAGTTATTGTCTACAACTTGTGGTTCAATGATGATGGGAATTCAGAGCTAGACTTTAACACAGATCCTGAGGATATTCGTATTGCTGGGGATATCAAGAAGGTTGAAGCACCTCCTGCTTGGAAAACATTAAATGAGCAACACATTGCTAATCGGCTTCGTTACTCTTTACGTGATTACATGTCCATATTGTACTTGCGTTTACCAGAAACTTTTCGAATTATATTGCGAGGGAAAGATGTGGTGCCACATAACATTGCTGATGATCTTAAATATACTGAATATATCATCTATAAACCACAAGTTGGCGGACATGTTCAGGCAACAATTGTTACGACCATCGGATTTCTTAAGGAAGCTCCTCATGTCAATATCCATGGTTTCAATGTATATCACAAAAATCGGCTGATACTGCCATTTTGGCAGGTTGTGAGCTATCTAGACAGTAGGGGTAGAGGAGTTGTTGGTATCCTGCAAGCAGATTTTATTGAGCCATCTCATAATAAACAAGACTTTGAGAGAACTTCCCTGCTTCAAAAGCTTGAAGCGCGGGATTATCATTGTAAGCTAATTGGATACCAGGAAAAGAAGAAGTGTCCACCTCCAGCTACCCCATTATTGCATCCATCACCAGTCATACTGAACAAAAATTCTTCCTCTGTCGTCAATAGAAAAACTGCTCCATATGGAAAATGTGGACAACACACAACAAACCCACAAAGCAGACCACAGCTAGTGTCTCACAAGAGGAAGAGTCCTGAAGTGATAGACCTTGAGAACATGAAAAAGCATCCAAGGGAAGAAACTACTACAGGTGTTGGTTTAAGGCAGAGTAAACAGATCATTGCAACTCCTGCAGCAGAGCCGGTGATGGACCAAGAGACTATAACCTTGATGGAAGAAAACAAGAAACTATCTGACCAATTGTTGGAATATGAAAAGGCAGGGGAAGAACTTAATCTCAAGGTGATGACTCTCAGAAACAAAATACAAGAAGCTGGACGTGAGTATAGTCAACTATTGGCTGAACTAAAGTCCTTAGACTTGAAAGAAGAATAA 2175 0.3963 MMKRRFLYLLESKTPLSLSLSPLSLLTCVKSAIQKQKHKSKPRLTSSLHSVIKDMGTAEVVYLSSDDESEEVGLKPVKLEPNFVIDAKQQNKNNESSLARSQRSRSHPIGHDSEENTSSNAPSTGHSNSSVLDQGLSPVDDTGISYASSISAAPVCRQFWKAGNYDDGLGSKVTVQNAKNHMHVHPMFLHSNATSHKWAFGAIAELLDNAIDEIENGATFVIVDKTSNLKDGSPTLLIQDDGGGMDPEAMRHCMSFGFSQKSKFSIGKYGNGFKTSTMRLGADVIVFSCHLNDRIMTQSIGLLSYTFLTQTQLDRIVVPMVNYEYDTSTGSLQILNGSEHFVANLSLLLRLSPYSSEAELLKQFDDIGSHGTKVIVYNLWFNDDGNSELDFNTDPEDIRIAGDIKKVEAPPAWKTLNEQHIANRLRYSLRDYMSILYLRLPETFRIILRGKDVVPHNIADDLKYTEYIIYKPQVGGHVQATIVTTIGFLKEAPHVNIHGFNVYHKNRLILPFWQVVSYLDSRGRGVVGILQADFIEPSHNKQDFERTSLLQKLEARDYHCKLIGYQEKKKCPPPATPLLHPSPVILNKNSSSVVNRKTAPYGKCGQHTTNPQSRPQLVSHKRKSPEVIDLENMKKHPREETTTGVGLRQSKQIIATPAAEPVMDQETITLMEENKKLSDQLLEYEKAGEELNLKVMTLRNKIQEAGREYSQLLAELKSLDLKEE 724
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal4g0836 724 Pfam Morc6 ribosomal protein S5 domain 2-like 427 556 IPR041006 -
Lal4g0836 724 MobiDBLite consensus disorder prediction 85 135 - -
Lal4g0836 724 MobiDBLite consensus disorder prediction 600 623 - -
Lal4g0836 724 PANTHER ZINC FINGER CW-TYPE COILED-COIL DOMAIN PROTEIN 3. 55 720 IPR045261 GO:0016887
Lal4g0836 724 Coils Coil 674 722 - -
Lal4g0836 724 MobiDBLite consensus disorder prediction 600 618 - -
Lal4g0836 724 Pfam Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 201 297 - -
Lal4g0836 724 MobiDBLite consensus disorder prediction 113 135 - -
Lal4g0836 724 SUPERFAMILY ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 199 399 IPR036890 -
Lal4g0836 724 MobiDBLite consensus disorder prediction 86 104 - -
Lal4g0836 724 PANTHER HISTIDINE KINASE-, DNA GYRASE B-, AND HSP90-LIKE ATPASE FAMILY PROTEIN 55 720 - -
Lal4g0836 724 Gene3D - 179 378 IPR036890 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal4g0836 Lal-Chr4 7100180 7123899 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal4g0836 - - gmx:100795667 956.051
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal4g0836 4 7100180 7123899 Lal4g0836 4 7100180 7123899 ECH