Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal4g0747 ATGGCAGCAGCAACAACCATCATCTCAATCTCCTCAGCTTCACTAACTCCAAAACTTCAAAACAGAATCCTGAAACACAAACACAACCACTATGAACAAGTTCCAACATCCTCTTTCATGGGTACTACAACAATTACTCTTAACATATCAAAACAGAGAATTATTACAAGTGTTACACGTAGTGGTAGAGTGAGTTGCATGGCATCTTCATCTTCCAGTAATCTTCCTTCAGCTCTTTTGTTTGACTGTGATGGAGTGCTTGTTGACACTGAGAAAGATGGCCACCGTATATCTTTCAATGAAACCTTCCAAGAGAAAGAACTAGGCTTTACATGGGATGTGGACTTGTATGGGGAGTTGCTCAAAATTGGAGGTGGTAAAGAAAGGATGGCAGCATACTTTACAAAGACTGGTTGGCCTGCAAATGCCCCGGCCGGTGAACACGAAAGAAAAGATTTCATAGCTTCACTCCACAAGCGAAAGACAGAACTATTCATGGCCCTTATTGAGAAAAAACTGTTGCCTCTTCGCCCAGGTGTTGCAAAGCTTATTGATCAGGCTTTAAGTCAAGGAATCAATGTTGCTGTTTGCAGCACTTCCAATGAGAAGGCGGTCTCTGCAATAGTTTCATTCTTGCTTGGACCTGAGCGAGCCGAAAAAATCAAGATATTTGCAGGAGATGTGGTTCCCCGCAAAAAACCTGATCCGGCCATATATCTATTAGCAGCCAGCACTCTGGGAGTTGAACCTTCAAGATGTGTTGTGGTGGAGGACAGTGCCATAGGCCTAGCAGCTGCTAAAGGAGCCGGTATGAAGTGTATAATAACAAAGAGCGGCTATACAGCAGATGAAGATTTCTTAAATGCAGACGCGATCTTCGACTTCATCGGTGATCCTCCAGAGGAGAGATTTGACTTGGCATTCTGTGGAAGCCTACTTGAGAAGCAATATGTGAGCTAG 960 0.4365 MAAATTIISISSASLTPKLQNRILKHKHNHYEQVPTSSFMGTTTITLNISKQRIITSVTRSGRVSCMASSSSSNLPSALLFDCDGVLVDTEKDGHRISFNETFQEKELGFTWDVDLYGELLKIGGGKERMAAYFTKTGWPANAPAGEHERKDFIASLHKRKTELFMALIEKKLLPLRPGVAKLIDQALSQGINVAVCSTSNEKAVSAIVSFLLGPERAEKIKIFAGDVVPRKKPDPAIYLLAASTLGVEPSRCVVVEDSAIGLAAAKGAGMKCIITKSGYTADEDFLNADAIFDFIGDPPEERFDLAFCGSLLEKQYVS 319
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal4g0747 319 SFLD Haloacid Dehalogenase 75 302 - -
Lal4g0747 319 SUPERFAMILY HAD-like 77 295 IPR036412 -
Lal4g0747 319 PANTHER CBBY-LIKE PROTEIN 55 318 - -
Lal4g0747 319 CDD HAD_CbbY-like 78 278 - -
Lal4g0747 319 Pfam Haloacid dehalogenase-like hydrolase 79 275 IPR041492 -
Lal4g0747 319 Gene3D Putative phosphatase; domain 2 90 174 IPR023198 -
Lal4g0747 319 Gene3D - 78 294 IPR023214 -
Lal4g0747 319 TIGRFAM HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 159 275 IPR006439 -
Lal4g0747 319 SFLD phosphoglycolate phosphatase 75 302 - -
Lal4g0747 319 PANTHER XYLULOSE-1,5-BISPHOSPHATE (XUBP) PHOSPHATASE 55 318 IPR044999 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal4g0747 Lal-Chr4 6242241 6247190 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal4g0747 - - gmx:100816266 479.944
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal4g0747 4 6242241 6247190 Lal4g0747 4 6242241 6247190 ECH