Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal4g0704 ATGGAAGTAACAAAAGACTCTAATTCTTCAAACCCGCTTCTGATCCACGATTCAGATTCAGAGCTCGAACTCTACACTATTCCAAGCTCTTCCCGTTGGTTTGTATGGGACGAAATCCACGAAACTGAGAGAACATCGTTGAAGGAATTCTTCGATGGAAGCTCGTTATCTCGAACCCCGAAGATATACAAAGAGTACAGAGACTTCATCATCAACAAGTACAGAGAAGAACCTTCTAGAAGGCTCGCTTTCACCGACGTGCGAAAATCACTTGTTGGTGACGTCACAGTGCTTAACAAGGTTTTCAAATTCTTGGAGAATTGGGGTTTGATCAACTACGGCGCGCCTCCGTTGGGAGCAGAGGGTGGGGATGCGGCTGAGGAGGTGGAGGAGAAGTGGAATGTTAGGGTTGAGGAAGGAGCGCCTAATGGCATCCGTGTTTCGGCCATGCCGAATTCATTGAAACCAATTTCGTTGCCTCGTGGTAGTGCCACTGCTAAGACTGGTAAGGATGCAGGTGGTAGTGGTGGTGGTGGGGCTGGTATTAAATTGCCGCTGCTGGCGTCTTATTCGGATGTTTACGGGGATTTTCTGAGGGAGGAGGTGAATTGCGGGCTCTGCGGTGATAAATGTGATTCAGGACACTACACAAGTACTCAGGATAGTTTCATTATTTGTCCAAAATGTTTCAAAAATGGGAATTATGGGGAGACCAGGTCTGCGGGGGATTTCATATCAAATGAGTCCAGTGAGAACAGTGGCAAACATGAAGCTACTTGGACTGAGGGAGAAACTCTTCTCCTTTTAGAATCTGTTTTGAAGCATGGGGATGAATGGGAACTTGTTTCTCAAAGTGTTCAAACCAAGAGTAAACTTGATTGCATCTCAAAACTCATTGAGCTGCCCTTTGGGGAGCTCATATTGGGATCTGCTCACAGAAATGTTAACAGTAATAGTGCTAATGGCATCATGAACAATGCAAAACAAGTTCAGTCATCTTCATCTGATCACCAAGAAACATCTAAGGCACAGGATCAATCTCTCGAAATTTCAAATGAAAATGAGCAGAATGGAGATGCTGTGAAGGAAAGTCCTTCCAAAAGACAGCGTGTTACTCCTCTTTCGGATTCCAGCAGTTCACTGATGAAGCAGGTGGGACTTATCTCTACAGTGGTTGACCCTCATATCACAGCTGCTGCAGCTGATGCTGCTATTATGGCACTTTGTGATGAGAACCTGTGTCCAAGGGAGATATTTGATGTTAAAGAGGGTTATGCTCCTATAATGAACTCCCTGTATAGGAACTCAGCAAGAGCCCTTGATGGTGAAGAATTAGAGATGGAGAGGTCTACTGAGTCAGGAATAGATGACAAATGCCCAAATGATGACATACCTTTGACACTACGGATAAGAGCTGCCATTGCAACTGCTCTTGGAGCTGCTGCTGCTCGAGCAAAATTGTTGGCGGACCAGGAAGACAGAGAGATTGAACATTTGGTAGCAACTATAATCGAAGCACAGATCGAGAAATTGCAACACAAGGTCAAGCATTTTGATGATCTGGAGCAGATGATAGAAAAGGAACATGCTGAAACAGAAGAGCTAAAAGATTCTATATTGACCGAACGGATTGATGTGTTAAGGAGGACATTTAGATCCGGAGTCACTAGGTGGAAAGATTATTCTTATGTTAAATCTTAG 1701 0.4433 MEVTKDSNSSNPLLIHDSDSELELYTIPSSSRWFVWDEIHETERTSLKEFFDGSSLSRTPKIYKEYRDFIINKYREEPSRRLAFTDVRKSLVGDVTVLNKVFKFLENWGLINYGAPPLGAEGGDAAEEVEEKWNVRVEEGAPNGIRVSAMPNSLKPISLPRGSATAKTGKDAGGSGGGGAGIKLPLLASYSDVYGDFLREEVNCGLCGDKCDSGHYTSTQDSFIICPKCFKNGNYGETRSAGDFISNESSENSGKHEATWTEGETLLLLESVLKHGDEWELVSQSVQTKSKLDCISKLIELPFGELILGSAHRNVNSNSANGIMNNAKQVQSSSSDHQETSKAQDQSLEISNENEQNGDAVKESPSKRQRVTPLSDSSSSLMKQVGLISTVVDPHITAAAADAAIMALCDENLCPREIFDVKEGYAPIMNSLYRNSARALDGEELEMERSTESGIDDKCPNDDIPLTLRIRAAIATALGAAAARAKLLADQEDREIEHLVATIIEAQIEKLQHKVKHFDDLEQMIEKEHAETEELKDSILTERIDVLRRTFRSGVTRWKDYSYVKS 566
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal4g0704 566 SMART sant 256 304 IPR001005 -
Lal4g0704 566 ProSiteProfiles SANT domain profile. 255 306 IPR017884 -
Lal4g0704 566 MobiDBLite consensus disorder prediction 328 377 - -
Lal4g0704 566 ProSiteProfiles Myb-like domain profile. 252 294 IPR001005 -
Lal4g0704 566 SUPERFAMILY Homeodomain-like 22 118 IPR009057 -
Lal4g0704 566 PANTHER SWI/SNF COMPLEX-RELATED 24 557 - -
Lal4g0704 566 SUPERFAMILY Homeodomain-like 256 306 IPR009057 -
Lal4g0704 566 PANTHER BRAHMA ASSOCIATED PROTEIN 155 KDA 24 557 - -
Lal4g0704 566 Gene3D - 31 117 IPR036388 -
Lal4g0704 566 Coils Coil 518 538 - -
Lal4g0704 566 CDD SANT 259 297 IPR001005 -
Lal4g0704 566 Pfam SWIRM-associated region 1 476 550 IPR032451 -
Lal4g0704 566 Gene3D - 256 304 - -
Lal4g0704 566 Pfam SWIRM domain 28 113 IPR007526 GO:0005515
Lal4g0704 566 ProSiteProfiles SWIRM domain profile. 25 122 IPR007526 GO:0005515
Lal4g0704 566 Pfam Myb-like DNA-binding domain 259 298 IPR001005 -
Lal4g0704 566 MobiDBLite consensus disorder prediction 328 359 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal4g0704 Lal-Chr4 5703896 5709699 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal4g0704 K11649 - gmx:100800135 733.791
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal4g0704 4 5703896 5709699 Lal4g0704 4 5703896 5709699 ECH