Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal4g0684 ATGGCCACTTCAATGGAAAATGGTGAATGTATCTTAGTTTTAGTTTTAGTGTTGGTGGGGTGTTTTGTTTCCTCAGAATCTAAGTTCATAAGGTACAATACTACTTCAACTATTGTCCCTGGGAAGCTCAATGTTCACTTGGTTCCTCATACTCATGATGATGTTGGATGGTTGAAGACTATTGACCAGTACTATGTTGGCTCCAACAACTCCATTCAGGGAGCGTGTGTCCAAAATGTGCTGGACTCATTGGTACCTGCATTGTTGGCTGACAAAAATCGCAAATTTATATATGTTGAACAGGCATTTTTCCAGCGTTGGTGGAGAGAACAGAGTGAGGTTGTTCAGAACACAGTCAAGCAGCTAGTCAACTCTGGTCAATTGGAGTTCATGCACCTCCCTGAATGGCCTAAGGGTTGCCGCAGTCCTATCTCAGGGTTATTCTCAGAGCAACTATCGAGCCTTATTCTCACTAGAAATGGTGGTATGTGTATGCATGATGAGGCTACCACACACTATATTGACATGATTGATCAGACAACCCTCGGACACCGATTTCTCAAAGAAGAATTTGGTGTAACTCCTAGAATTGGGTGGCAAATTGATCCATTTGGACATTCTGCAGTGCAGGCTTATTTGTTGGGAGCAGAGGTTGGATTTGACTCTCTATTCTTTGCGCGAATTGACTACCAAGACAGAGCTAAGAGGAAAGACGAAAAAACACTTGAAGTCGTGTGGCAGGGCTCTAAGAGCCTTGGTTATACTGCACAAATATTTTCTGGTGCGTTCCCTCAGAATTATGAACCTCCTACCGATAATTTCTACTTTGAAGTTAATGATGATTCTCCTGTTGTCCAGGATGATGTCAATTTGTTTGACTACAATGTCCCCGATCGCGTAAATGAGTTTGTCTCAGCTGCAATATCACAGGCCAATATTACGCGCACAAACCATATAATGTGGACGATGGGGACAGATTTCAAGTACCAATATGCACATACCTGGTTTAGGCAAATGGACAAGTTTATTCACTATGTTAATCAAGATGCACGAGTTCATGCCCTATACTCGACCCCATCAATATATACCGATGCAAAACATGCTGCAAATGAGGCCTGGCCACTCAAGACGGATGACTTCTTTCCGTACGCTGATCGTATAAATGCCTATTGGACGGGGTATTTTACGAGTAGGCCGGCTCTCAAAGGTTATGTCAGATCGATGAGCGGCTACTATTTGGCAGCAAGACAGTTGGAGTATTTCAAAGGGAAGAGTGCTTTGGGTCCTAAAACCGACTCTTTGGCTGATGCTTTGGCTATTGCTCAACACCACGATGCATTATCCGGGACATCAAAGCAGCATGTGGCTAATGATTACGCAAAACGACTTTCAATAGGCTACACAGAGGCTGAGAAGGTTGTTGCAGAGTCACTTGCATGCTTGACAGATGCAGCAACCAAAACTGATTGTAGTAGTTCACAAGTTAAATTTCAACAGGCAAGTAGTGATGTTCCTTTGTTCAACAACTGTTATTGTTTTTCTATGAGGAAGTATCATTGTCCACTTCTGAACATAACTCATTGTCCGGCATCAGAAGCGAACCTCTCGTATGGGAAAAACCTGGTTGTTGTTATTTACAATCCACTAGGATGGAAAAGAGATGATGTTATAAGGATTCCTGTCGCCAATGAAAAAGTTATTGTTCGGGATTCCAGTGGAAATGAAATCCAATCACAGCTCATACCGATACTCGACGAGTTTCTTGGTTTAAGAAACTACCACACCAAGGCATACCTGGGAGTGTCTCCAACTGTAAACCCCAAATACTGGCTCACATTTTCAGCAACAGTCCCCGCACTCGGTTTTAGCACTTACTATGTTTCCAAGGCCAAACAACCAGCTACTATTTCAGATACACATACGACATACGAGTCACGAAATCAGAGTGATACAATTGAAGTGGGCATAGGAAACTTGAAACTAATTTATTCTAAAAAGGAAGGGAAACTTACTCAATATATCAACAGCAGAAGCAAGGTAAAAGAATCTATAGAACAAGCATACAAATTTTATGCCGGGTATGGAGATGATGGAACACAAAATGCTCAGGCATCCGGAGCGTATATTTTTCGTCCCAATGGTTCATCATCTCCCATTAAATCCCACGGGCAGTCTCCTCTCACAGTCTTTCGGGGACCGATTTTGCATGAAGTGCATCAGAAGATCAATTCATGGATATACCAGATCACTAGACTGTATAAGGGGAAAGAGCATGCTGAAATTGAGTTTATTGTTGGACCTATACCCATTAATGATGGAGTTGGTAAGGAAATTGCAACTGAGATTAAAACAAATCTCGCAAGCAAGAAAAAATTCTATACTGATTCCAACGGGCGTGATTTTATTGAACGGATTCGAGACTATCAAAAAGATTGGGACTTGGAAGTAAATCAGCCTGTTGCTGGAAATTATTACCCGATCAATCTCGGGATTTACCTAAAAGACGAAAGTAAAGAATTCTCGGTATTGGTAGATAGATCTGTCGGGGGCTCTAGCGTCGTGGATGGGCAATTGGAACTAATGGTTCATAGGAGGTTACTTGTGGATGATGGTAGAGGTGTTGCAGAGGCACTGAATGAAACAGTTTGTGTCCATGATAAGTGCACTGGATTAACTGTACTAGGAAAATACTACTTCAGAATTGATCCTGTGGGAGAGGGTGCTAGATGGCGTCGATCATTTGGTCAGGAGATATACTCGCCGTTACTTTTAGCCTTCGCCGAGAGTGAAAATAGGTGGGGAGATTCTCATGTCACAACCTTCTCCGGACTGGATTCCTCATACAACTTACCCGACAATGTCGCAATAATAACCCTCCAGGATCAGGGTGATGGAAAAGTTCTACTTCGGCTGGCACACTTATATGAGATTCTCGAGGACGCGCAACTTTCTGTTGTGGCAAGTGTAGAGCTCAAAAAGGTGTTCCCCAATAAACAGATAAACAAAGTAAGTGAGGTGAGTTTATCAGCTAACCAAGAAAGAGCAGAAATGGAGAGGAAGAGATTAGTCTGGCAAGTCGAAGGGTTACCTCAAAATCGCAAATGGCTAAGGGGAAGACCGGTAGATCCAGAAAAGCTACTTATAGAACTTCATCCTGCAGAAATAAGGACCTTTGTTATCAGTTTTAGGCAGTAA 3195 0.4244 MATSMENGECILVLVLVLVGCFVSSESKFIRYNTTSTIVPGKLNVHLVPHTHDDVGWLKTIDQYYVGSNNSIQGACVQNVLDSLVPALLADKNRKFIYVEQAFFQRWWREQSEVVQNTVKQLVNSGQLEFMHLPEWPKGCRSPISGLFSEQLSSLILTRNGGMCMHDEATTHYIDMIDQTTLGHRFLKEEFGVTPRIGWQIDPFGHSAVQAYLLGAEVGFDSLFFARIDYQDRAKRKDEKTLEVVWQGSKSLGYTAQIFSGAFPQNYEPPTDNFYFEVNDDSPVVQDDVNLFDYNVPDRVNEFVSAAISQANITRTNHIMWTMGTDFKYQYAHTWFRQMDKFIHYVNQDARVHALYSTPSIYTDAKHAANEAWPLKTDDFFPYADRINAYWTGYFTSRPALKGYVRSMSGYYLAARQLEYFKGKSALGPKTDSLADALAIAQHHDALSGTSKQHVANDYAKRLSIGYTEAEKVVAESLACLTDAATKTDCSSSQVKFQQASSDVPLFNNCYCFSMRKYHCPLLNITHCPASEANLSYGKNLVVVIYNPLGWKRDDVIRIPVANEKVIVRDSSGNEIQSQLIPILDEFLGLRNYHTKAYLGVSPTVNPKYWLTFSATVPALGFSTYYVSKAKQPATISDTHTTYESRNQSDTIEVGIGNLKLIYSKKEGKLTQYINSRSKVKESIEQAYKFYAGYGDDGTQNAQASGAYIFRPNGSSSPIKSHGQSPLTVFRGPILHEVHQKINSWIYQITRLYKGKEHAEIEFIVGPIPINDGVGKEIATEIKTNLASKKKFYTDSNGRDFIERIRDYQKDWDLEVNQPVAGNYYPINLGIYLKDESKEFSVLVDRSVGGSSVVDGQLELMVHRRLLVDDGRGVAEALNETVCVHDKCTGLTVLGKYYFRIDPVGEGARWRRSFGQEIYSPLLLAFAESENRWGDSHVTTFSGLDSSYNLPDNVAIITLQDQGDGKVLLRLAHLYEILEDAQLSVVASVELKKVFPNKQINKVSEVSLSANQERAEMERKRLVWQVEGLPQNRKWLRGRPVDPEKLLIELHPAEIRTFVISFRQ 1064
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal4g0684 1064 Gene3D Glycoside hydrolase family 38, central domain 353 431 IPR037094 GO:0004559|GO:0006013
Lal4g0684 1064 PANTHER ALPHA-MANNOSIDASE 159 1063 - -
Lal4g0684 1064 PANTHER ALPHA-MANNOSIDASE 19 131 - -
Lal4g0684 1064 SUPERFAMILY Glycoside hydrolase/deacetylase 32 385 IPR011330 GO:0005975
Lal4g0684 1064 Gene3D - 938 1064 - -
Lal4g0684 1064 Gene3D - 529 654 IPR013780 -
Lal4g0684 1064 SUPERFAMILY Families 57/38 glycoside transferase middle domain 388 482 IPR028995 -
Lal4g0684 1064 PANTHER ALPHA-MANNOSIDASE 19 131 - -
Lal4g0684 1064 PANTHER ALPHA-MANNOSIDASE 159 1063 - -
Lal4g0684 1064 Gene3D Glycoside hydrolase 38, N terminal domain 43 134 IPR027291 -
Lal4g0684 1064 Gene3D Glycoside hydrolase 38, N terminal domain 153 352 IPR027291 -
Lal4g0684 1064 Gene3D Glycoside hydrolase family 38, central domain 432 487 IPR037094 GO:0004559|GO:0006013
Lal4g0684 1064 Pfam Glycosyl hydrolases family 38 C-terminal beta sandwich domain 953 1058 IPR041147 -
Lal4g0684 1064 SMART Alpha_mann_mid_2 389 463 IPR015341 GO:0004559|GO:0006013
Lal4g0684 1064 Pfam Glycosyl hydrolases family 38 C-terminal domain 657 872 IPR011682 GO:0004559|GO:0006013
Lal4g0684 1064 Pfam Glycosyl hydrolases family 38 N-terminal domain 160 384 IPR000602 GO:0004559|GO:0006013
Lal4g0684 1064 Pfam Glycosyl hydrolases family 38 N-terminal domain 44 131 IPR000602 GO:0004559|GO:0006013
Lal4g0684 1064 Pfam Alpha mannosidase middle domain 389 481 IPR015341 GO:0004559|GO:0006013
Lal4g0684 1064 Gene3D - 655 920 - -
Lal4g0684 1064 CDD GH38N_AMII_LAM_like 43 348 - -
Lal4g0684 1064 SUPERFAMILY Galactose mutarotase-like 515 1062 IPR011013 GO:0003824|GO:0005975|GO:0030246
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal4g0684 Lal-Chr4 5360203 5369950 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal4g0684 11 976 Glycoside Hydrolase AT5G13980 65.499 0.0 1315
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal4g0684 K01191 - gmx:100798150 1751.49
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal4g0684 4 5360203 5369950 Lal4g0684 4 5360203 5369950 ECH